Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_F21.2
(1266 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 153 1e-36
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 153 1e-36
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 153 1e-36
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 153 1e-36
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 153 1e-36
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 153 1e-36
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 142 2e-33
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 71 7e-12
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 153 bits (372), Expect = 1e-36
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = +3
Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
+N HKR+HGVGFKKRAP A+K IRKFA K+ GTPD+R+ TRLNK +W+KG+ NVP+R+RV
Sbjct: 23 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 82
Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 446
RLSR RN+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 83 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 153 bits (372), Expect = 1e-36
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = +3
Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
+N HKR+HGVGFKKRAP A+K IRKFA K+ GTPD+R+ TRLNK +W+KG+ NVP+R+RV
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 446
RLSR RN+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 153 bits (372), Expect = 1e-36
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = +3
Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
+N HKR+HGVGFKKRAP A+K IRKFA K+ GTPD+R+ TRLNK +W+KG+ NVP+R+RV
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 446
RLSR RN+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 153 bits (372), Expect = 1e-36
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = +3
Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
+N HKR+HGVGFKKRAP A+K IRKFA K+ GTPD+R+ TRLNK +W+KG+ NVP+R+RV
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 446
RLSR RN+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 153 bits (372), Expect = 1e-36
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = +3
Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
+N HKR+HGVGFKKRAP A+K IRKFA K+ GTPD+R+ TRLNK +W+KG+ NVP+R+RV
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 446
RLSR RN+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 153 bits (372), Expect = 1e-36
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = +3
Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
+N HKR+HGVGFKKRAP A+K IRKFA K+ GTPD+R+ TRLNK +W+KG+ NVP+R+RV
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 446
RLSR RN+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 142 bits (344), Expect = 2e-33
Identities = 61/89 (68%), Positives = 76/89 (85%)
Frame = +3
Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
+N HKR+HGVGFKKRAP A+K IRKFA K+ GTPD+R+ TRLNK +W+KG+ NVP+R+RV
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIK 422
RLSR RN+DE S +KL+TLVTYVPV + K
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 71.3 bits (167), Expect = 7e-12
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 312 NVPFRVRVRLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 446
NVP+R+RVRLSR RN+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,856,236
Number of Sequences: 237096
Number of extensions: 1121257
Number of successful extensions: 1324
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18110209670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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