Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F21.2
         (1266 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical pr...   130   2e-30
Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical pr...    97   2e-20

>Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical
           protein W09C5.6a protein.
          Length = 122

 Score =  130 bits (315), Expect = 2e-30
 Identities = 59/100 (59%), Positives = 75/100 (75%)
 Frame = +3

Query: 156 VNFHKRLHGVGFKKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVXNVPFRVRV 335
           ++ H R+ G+G KKRAP AI  I+KFA+ Q  T D+RV T+LNKF+WSKG+ NVP+RVRV
Sbjct: 23  IHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGIKNVPYRVRV 82

Query: 336 RLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQTENVDASQ 455
           RLSR RN+DE SA KL+TL TYVP  +  GL   NVD+ +
Sbjct: 83  RLSRRRNEDEDSAQKLYTLCTYVPCTNFHGLTNVNVDSEE 122


>Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical
           protein W09C5.6b protein.
          Length = 70

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = +3

Query: 252 TPDIRVXTRLNKFLWSKGVXNVPFRVRVRLSRXRNDDEXSAHKLFTLVTYVPVASIKGLQ 431
           T D+RV T+LNKF+WSKG+ NVP+RVRVRLSR RN+DE SA KL+TL TYVP  +  GL 
Sbjct: 3   TNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHGLT 62

Query: 432 TENVDASQ 455
             NVD+ +
Sbjct: 63  NVNVDSEE 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,509,343
Number of Sequences: 27780
Number of extensions: 169544
Number of successful extensions: 257
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)