Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_F20.2
(1253 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 282 4e-76
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 93 4e-19
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 83 6e-16
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 80 4e-15
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 76 5e-14
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 48 2e-05
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 44 3e-04
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907... 42 8e-04
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 42 0.001
04_03_0829 + 20123522-20123668,20124771-20124881 30 4.4
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 282 bits (692), Expect = 4e-76
Identities = 135/192 (70%), Positives = 156/192 (81%)
Frame = +3
Query: 378 YSDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAM 557
Y HC+ MEE+SRASG + LSYGAHSNLC+NQ+ R+G+ QK KYLPKL SGEH+GALAM
Sbjct: 94 YMYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKLKYLPKLISGEHVGALAM 153
Query: 558 SEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGISA 737
SEP SGSDVVSMK +AEK YV+NGNK W TNGP A LVVYAKT+ + + GI+A
Sbjct: 154 SEPNSGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSK--GITA 211
Query: 738 FLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSGLXLER 917
F+IEK PGFSTAQKLDKLGMRGS+T ELVFE+C VP N+LG+E KGVYV+MSGL LER
Sbjct: 212 FIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLDLER 271
Query: 918 XVLAAGPVGLMQ 953
VLAAGP+GLMQ
Sbjct: 272 LVLAAGPIGLMQ 283
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 93.1 bits (221), Expect = 4e-19
Identities = 60/185 (32%), Positives = 93/185 (50%)
Frame = +3
Query: 393 VIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGS 572
+ M E++R + HS+L + I G+E QK KYLP L +G A++EP
Sbjct: 115 ITMAEIARVDASCSTFILVHSSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNH 174
Query: 573 GSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGISAFLIEK 752
GSD S+ A K + ++G K WI N ADVLVV A+ + +KQ +G F++ K
Sbjct: 175 GSDASSLITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARN--ANTKQLNG---FIVRK 229
Query: 753 DYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSGLXLERXVLAA 932
PG + +K+G+R G++VF VP + L N + L + R ++A
Sbjct: 230 GAPGLKATKIENKIGLRMVQNGDIVFNKVFVPEEDRLPGVN-SFQDISKVLAISRVMVAW 288
Query: 933 GPVGL 947
P+G+
Sbjct: 289 QPIGI 293
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 82.6 bits (195), Expect = 6e-16
Identities = 54/159 (33%), Positives = 82/159 (51%)
Frame = +3
Query: 471 QINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFW 650
QI G+E QK KYLP L IG A++EP GSD S++ A K + L+G K W
Sbjct: 118 QIALCGSEAQKQKYLPSLTQFRTIGCWALTEPDYGSDASSLRTAATKVPGGWHLDGQKRW 177
Query: 651 ITNGPDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTGELVF 830
I NG ADVL++ A+ S + Q +G F+++K PG + +K+G+R ++V
Sbjct: 178 IGNGTFADVLIILARN--SDTNQLNG---FIVKKGAPGLKCTKIENKIGLRMVQNADIVL 232
Query: 831 EDCKVPAANLLGQENKGVYVLMSGLXLERXVLAAGPVGL 947
VP + L N + L + R ++A P+G+
Sbjct: 233 NKVFVPDEDRLTGIN-SFQDINKVLAMSRIMVAWQPIGI 270
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 79.8 bits (188), Expect = 4e-15
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Frame = +3
Query: 480 RNGTEEQKSKYLPKLCSGEHIGALAMSEPG-SGSDVVSMKLRAEKKGDYYVLNGNKFWIT 656
R GT+EQ+ ++L L G+ AM+EP + SD +++ ++GD+YV+NG K+W +
Sbjct: 507 RYGTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNIECSISRQGDFYVINGTKWWTS 566
Query: 657 NG--PDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTG--EL 824
P +LV+ KT++S K + S L++ PG + L G + G E+
Sbjct: 567 GAMDPRCQILVLMGKTDFSAPKHKQQ-SMILVDVKTPGVQIRRPLLVFGFDDAPHGHAEI 625
Query: 825 VFEDCKVPAANLLGQENKGVYVLMSGL 905
FE+ +VPA N+L E +G + L
Sbjct: 626 TFENVRVPATNILLGEGRGFEIAQGRL 652
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 76.2 bits (179), Expect = 5e-14
Identities = 49/148 (33%), Positives = 74/148 (50%)
Frame = +3
Query: 405 ELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDV 584
E++R IA S L + I + G+E QK KYL L + + A+SEP GSD
Sbjct: 130 EIARVDASIASFCLVQSCLAMVSIAQLGSEAQKEKYLRPLSKMQKVCVYALSEPNHGSDA 189
Query: 585 VSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPG 764
S+ A K ++LNG K W N AD+ VV A N ST++ I+ F++ PG
Sbjct: 190 SSLNTTARKVPGGWILNGQKRWPANSSFADIFVVLA-CNTSTNQ----INGFIVNGGAPG 244
Query: 765 FSTAQKLDKLGMRGSNTGELVFEDCKVP 848
++ +K+ +R +++ ED VP
Sbjct: 245 LKISKIDNKMSLRVVQNCDILLEDVFVP 272
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 47.6 bits (108), Expect = 2e-05
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Frame = +3
Query: 450 HSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRA--EKKGDY 623
H + V I GTEEQ+ K+LP + IG A +E G GS+V ++ A + K D
Sbjct: 107 HWGMFVPAIKGQGTEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDE 166
Query: 624 YV-----LNGNKFWITN-GPDADVLVVYAKTNWSTSKQQHGISAFLIE----KDY---PG 764
+V L +K+W G + VVYA+ T + +GI F+++ +D+ PG
Sbjct: 167 FVIHSPTLTSSKWWPGGLGKASTHAVVYARL--ITEGKDYGIHGFIVQLRSLEDHSPLPG 224
Query: 765 FSTAQKLDKLGMRGSNT---GELVFEDCKVPAANLL 863
+ K G N+ G L F+ ++P +L
Sbjct: 225 VTLGDIGGKFGSGAYNSMDNGVLRFDHVRIPRDQML 260
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 44.0 bits (99), Expect = 3e-04
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Frame = +3
Query: 429 IALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRA- 605
+A+ G H L + I GT+ K+L + G +M+E G GS+V ++ A
Sbjct: 154 LAIKIGVHFFLWGSAIKFLGTKRHHDKWLSDTENYVIKGCFSMTELGHGSNVRGIETVAT 213
Query: 606 -EKKGDYYVLN-----GNKFWITNGPD-ADVLVVYAKTNWSTSKQQHGISAFLI------ 746
+ K +V+N K+WI + A +V+A+ + + + G+ AF+
Sbjct: 214 YDIKTREFVINTPCESAQKYWIGGAANHATHTIVFAQLH--INGRNEGVHAFVAQIRDEH 271
Query: 747 EKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLL 863
E P A K+G+ G + G + F + +VP NLL
Sbjct: 272 ENVMPNIQIADCGHKIGLNGVDNGRIWFNNIRVPRENLL 310
>06_02_0285 +
13789900-13790071,13790407-13790525,13790642-13790751,
13790887-13791046,13791407-13791483,13792299-13792470,
13792580-13792672,13793617-13793733
Length = 339
Score = 42.3 bits (95), Expect = 8e-04
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +3
Query: 624 YVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMR 803
++LNG K W NG ADV VV A +TS Q I+ F++ PG ++ +K +R
Sbjct: 102 WILNGQKRWPANGSFADVFVVLA---CNTSNNQ--INGFIVNGGSPGLKISKIENKTSLR 156
Query: 804 GSNTGELVFEDCKVP 848
+++ ED VP
Sbjct: 157 VVQNCDILLEDVFVP 171
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 41.5 bits (93), Expect = 0.001
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Frame = +3
Query: 381 SDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMS 560
+++ +ME A + + G +L I GT++ + ++ + + ++ G AM+
Sbjct: 133 AEYFAVMEAAGGADISLGVKLGVQYSLWGGSIINLGTKKHRDRFFDGIDNLDYPGCFAMT 192
Query: 561 EPGSGSDVVSMKLRA--EKKGDYYVLN-----GNKFWITN----GPDADVL--VVYAKTN 701
E GS+V +++ A + D +++N K+WI N G A V ++
Sbjct: 193 ELHHGSNVQALQTTATFDPVTDEFIINTPNDGAIKWWIGNAALHGKFATVFARLILPLQG 252
Query: 702 WSTSKQQHGISAFLIE-KD------YPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANL 860
GI AF++ +D PG K+G+ G + G L F ++P NL
Sbjct: 253 KGGDPADMGIHAFIVPIRDLDTNAVLPGIEINDCGHKIGLNGVDNGALRFRSVRIPRDNL 312
Query: 861 LGQ 869
L +
Sbjct: 313 LNR 315
>04_03_0829 + 20123522-20123668,20124771-20124881
Length = 85
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 435 LSYGAHSNLCVNQINRNGTEEQKSKYLPKL 524
L+ G NLC+ +R+G E +K+K P++
Sbjct: 26 LAIGQGENLCIQMQHRDGNENEKNKISPRV 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,740,245
Number of Sequences: 37544
Number of extensions: 479708
Number of successful extensions: 1113
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3876004116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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