Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F20.2
         (1253 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   3.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   3.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   5.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   5.6  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   9.7  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   9.7  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   9.7  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 12/65 (18%), Positives = 28/65 (43%)
 Frame = +3

Query: 693 KTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQE 872
           + NW++ +    +S  ++ +++P +   +   +   R    G+L  E+    A  +    
Sbjct: 152 RQNWASLQPYKKLSVEVVRREHPFWDDQRVEQEAKRRFEKYGQLFMEETLKAAKRMRPAA 211

Query: 873 NKGVY 887
           N G Y
Sbjct: 212 NWGYY 216


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 471 GSRTNSNELHMTRRYH 424
           GSRT  NEL   RR H
Sbjct: 48  GSRTTHNELEKNRRAH 63


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 592 IDTTSLPDPGSDIASAPICS 533
           ++T S P P   IASAP  S
Sbjct: 505 VETNSSPSPNPRIASAPSSS 524


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 517 GKYLLFCSSVPFLLIWFT 464
           GKYLLF   +  L IW T
Sbjct: 313 GKYLLFTMILVTLSIWIT 330


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 795 GMRGSNTGELVFEDCKVPAANLLGQENKGVYVL 893
           GMRG  + E + ++ K          +K VY++
Sbjct: 116 GMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLI 148


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 795 GMRGSNTGELVFEDCKVPAANLLGQENKGVYVL 893
           GMRG  + E + ++ K          +K VY++
Sbjct: 116 GMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLI 148


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 795 GMRGSNTGELVFEDCKVPAANLLGQENKGVYVL 893
           GMRG  + E + ++ K          +K VY++
Sbjct: 116 GMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLI 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,977
Number of Sequences: 438
Number of extensions: 5301
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42862491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)