Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F16.2
         (1269 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   6.2  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   6.2  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   8.2  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +3

Query: 714 SGLPVASCYRASAAVET----RGTPNSPGSGETERSYDRDLRI 830
           +G P  SC    A + +     GT  + G GE +RSYD +  I
Sbjct: 362 NGSPSTSCGAPPALLGSGEGGSGTHGTDGGGEFQRSYDDEEEI 404


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 475 RSLVQFAPARLAVRSSTRHALHSASSKTPLSYSNE 579
           R+++ FAP+     SST +A  S S+ +  ++SNE
Sbjct: 659 RTVLIFAPSSNQSSSSTPNAEQSPSASSKDTFSNE 693


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 548 HQRHHSAIVTKSTSVLSGDSKEPAPAPSPADSGVS-ELERDHHDYSTTDRLRHE 706
           HQ   S+  + S+S  S  S   +   SP DS +S  +++ +HD      ++H+
Sbjct: 104 HQHQQSSSSSSSSSSSSMSSSSSSSFSSP-DSPLSLVMKKPYHDEDEDHEMKHD 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,592
Number of Sequences: 2352
Number of extensions: 16701
Number of successful extensions: 102
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 145513932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)