Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_F16.2
(1269 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1259|AAF46433.1| 821|Drosophila melanogaster CG15365-P... 48 2e-05
AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin su... 32 1.9
AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4 ... 32 1.9
AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p pro... 32 1.9
AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-P... 32 1.9
BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p pro... 31 3.3
AE014297-959|AAF54392.2| 1112|Drosophila melanogaster CG8176-PB,... 31 3.3
AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,... 31 3.3
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC... 30 5.9
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB... 30 5.9
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA... 30 5.9
>AE014298-1259|AAF46433.1| 821|Drosophila melanogaster CG15365-PA
protein.
Length = 821
Score = 48.4 bits (110), Expect = 2e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 830 TEWSLCQRAGEIALLKTQLKDAQNEQTTKGHEYLTLKADXRQLKXTLDKXTXKS 991
+EW +C+R GEIALLKTQLK+A E K H ++LK + + + + KS
Sbjct: 493 SEWRVCERNGEIALLKTQLKEAHLEINMKDHAIVSLKHSSNRSSSSSNSNSNKS 546
Score = 34.3 bits (75), Expect = 0.36
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Frame = +2
Query: 371 GRLSAGGERYGSTPVLATRPPSHMTLYGSSSDV-----REGRWCXXXXXXXXXXXXXXXX 535
G ++A YGSTP LA P + +GS++D+ R
Sbjct: 290 GGVAAERYGYGSTPSLAPLPTASAQKFGSTTDLRHLAARRRNHRLLQRCSNEDALTLDLL 349
Query: 536 XXXXHQRHHSAIVTKSTSVLSGDSKEPAPAPSPADSGVSELE 661
H R A +KS+ + G S PSP+DSG+SELE
Sbjct: 350 STGSHDRPDGA-SSKSSGTVVGSSD---LTPSPSDSGISELE 387
>AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin
subunit SMC4 protein.
Length = 1409
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +2
Query: 857 GEIALLKTQLKDAQNEQTTKGHEYLTLKADXRQLKXTLDK 976
GE+ + ++QLK + +TT+ +Y TLK+ Q + +L++
Sbjct: 502 GEVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEE 541
>AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4
homolog Gluon protein.
Length = 1409
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +2
Query: 857 GEIALLKTQLKDAQNEQTTKGHEYLTLKADXRQLKXTLDK 976
GE+ + ++QLK + +TT+ +Y TLK+ Q + +L++
Sbjct: 502 GEVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEE 541
>AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p
protein.
Length = 1012
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +2
Query: 857 GEIALLKTQLKDAQNEQTTKGHEYLTLKADXRQLKXTLDK 976
GE+ + ++QLK + +TT+ +Y TLK+ Q + +L++
Sbjct: 502 GEVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEE 541
>AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-PA
protein.
Length = 1409
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +2
Query: 857 GEIALLKTQLKDAQNEQTTKGHEYLTLKADXRQLKXTLDK 976
GE+ + ++QLK + +TT+ +Y TLK+ Q + +L++
Sbjct: 502 GEVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEE 541
>BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p
protein.
Length = 1220
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 152 LQERHLSQ-SQFVARFVXF*NDDLDLTGQVHEDFER 48
++E HL Q +F++ ++ ++ D+ GQVH DF+R
Sbjct: 202 IEEVHLRQMKEFLSTYLEMLQNNHDMVGQVHSDFKR 237
>AE014297-959|AAF54392.2| 1112|Drosophila melanogaster CG8176-PB,
isoform B protein.
Length = 1112
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 152 LQERHLSQ-SQFVARFVXF*NDDLDLTGQVHEDFER 48
++E HL Q +F++ ++ ++ D+ GQVH DF+R
Sbjct: 181 IEEVHLRQMKEFLSTYLEMLQNNHDMVGQVHSDFKR 216
>AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,
isoform A protein.
Length = 1133
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 152 LQERHLSQ-SQFVARFVXF*NDDLDLTGQVHEDFER 48
++E HL Q +F++ ++ ++ D+ GQVH DF+R
Sbjct: 202 IEEVHLRQMKEFLSTYLEMLQNNHDMVGQVHSDFKR 237
>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
isoform C protein.
Length = 1570
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 551 QRHHSAIVTKSTSVLSGDSKEPAPAPSPADSGVSELERDHH 673
QRHHS T S S LSG K A + + S ++ +++HH
Sbjct: 963 QRHHSPSST-SISALSGAKKARKSATNSSSSNSTQQQQNHH 1002
>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
isoform B protein.
Length = 1570
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 551 QRHHSAIVTKSTSVLSGDSKEPAPAPSPADSGVSELERDHH 673
QRHHS T S S LSG K A + + S ++ +++HH
Sbjct: 963 QRHHSPSST-SISALSGAKKARKSATNSSSSNSTQQQQNHH 1002
>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
isoform A protein.
Length = 1570
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 551 QRHHSAIVTKSTSVLSGDSKEPAPAPSPADSGVSELERDHH 673
QRHHS T S S LSG K A + + S ++ +++HH
Sbjct: 963 QRHHSPSST-SISALSGAKKARKSATNSSSSNSTQQQQNHH 1002
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,956,414
Number of Sequences: 53049
Number of extensions: 797677
Number of successful extensions: 3685
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3680
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6824990175
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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