Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F13.2
         (1389 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    33   1.2  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    33   1.2  
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    30   8.6  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    30   8.6  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAPXXQXPFPPA 419
           P     P +PP     P  QP  PAPP   P  G     + P PPA
Sbjct: 310 PTYQPRPPAPPAPAPGPTYQPRPPAPP--APAPGPTYQPRPPSPPA 353



 Score = 32.3 bits (70), Expect = 1.6
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAP 446
           P     P +PP     P  QP  PAPP   P  G  P
Sbjct: 357 PTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPPP 393



 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAPXXQXPFPP 422
           P      + PP     P   P  P PP   P  G  P  Q P PP
Sbjct: 61  PSAPAPSYGPPQTRPPPPPPPPQPTPPAPRPSYG-PPQTQPPRPP 104


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAPXXQXPFPPA 419
           P     P +PP     P  QP  PAPP   P  G     + P PPA
Sbjct: 310 PTYQPRPPAPPAPAPGPTYQPRPPAPP--APAPGPTYQPRPPSPPA 353



 Score = 32.3 bits (70), Expect = 1.6
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAP 446
           P     P +PP     P  QP  PAPP   P  G  P
Sbjct: 357 PTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPPP 393



 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAPXXQXPFPP 422
           P      + PP     P   P  P PP   P  G  P  Q P PP
Sbjct: 61  PSAPAPSYGPPQTRPPPPPPPPQPTPPAPRPSYG-PPQTQPPRPP 104


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAPXXQXPFP 425
           P     P  PP     P   P  P PP   P  G  P    P P
Sbjct: 229 PPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPLP 272


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -3

Query: 556 PXXXXXPHSPPXXXXXPXXQPXDPAPPLXXPXXGKAPXXQXPFP 425
           P     P  PP     P   P  P PP   P  G  P    P P
Sbjct: 231 PPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPLP 274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,315,878
Number of Sequences: 53049
Number of extensions: 162375
Number of successful extensions: 667
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7599700944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)