Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F08.2
         (1289 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   0.93 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   4.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   8.6  

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 0.93
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 522 ILFLICASLSLGSFSPHSPRQLNILWH 442
           ILFL  A+L+LG   PH     N + H
Sbjct: 6   ILFLCLATLALGQKDPHFAADRNSIVH 32


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 201 QISTRHRSPQRDKAIPEKHRAFDPQ 275
           Q+ T H++P R  A+P K     P+
Sbjct: 57  QLFTHHKAPIRPVALPPKREIPSPK 81


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 169 APAXGGVKXPHRYRPGTVALREI 237
           APA  G+  P    PG +   EI
Sbjct: 265 APATTGIAGPFTQSPGVLGFNEI 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,448
Number of Sequences: 336
Number of extensions: 2313
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38021570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)