Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F07.2
         (1215 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p pro...    31   3.2  
AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA...    31   3.2  
M24441-1|AAA28652.1|  975|Drosophila melanogaster protein ( D.me...    30   5.5  
AY094959-1|AAM11312.1|  975|Drosophila melanogaster SD02406p pro...    30   5.5  
AE013599-2234|AAF58029.1|  975|Drosophila melanogaster CG7765-PA...    30   5.5  

>AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p
           protein.
          Length = 440

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +1

Query: 454 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHV 633
           Q  NEI++K G+   +    +    +V  + + LKN+     EAM K  +K  +      
Sbjct: 267 QLENEIQQKRGEDSVMNKENENLCHNVALKCLHLKNERQAQSEAMMKQTEKLKKAEDPRK 326

Query: 634 KNA--KEKFSQLKSE 672
            N   K+ F++ K +
Sbjct: 327 NNGTLKDSFNRKKKD 341


>AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA
           protein.
          Length = 1010

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +1

Query: 454 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHV 633
           Q  NEI++K G+   +    +    +V  + + LKN+     EAM K  +K  +      
Sbjct: 648 QLENEIQQKRGEDSVMNKENENLCHNVALKCLHLKNERQAQSEAMMKQTEKLKKAEDPRK 707

Query: 634 KNA--KEKFSQLKSE 672
            N   K+ F++ K +
Sbjct: 708 NNGTLKDSFNRKKKD 722


>M24441-1|AAA28652.1|  975|Drosophila melanogaster protein (
           D.melanogaster kinesinheavy chain mRNA, complete cds. ).
          Length = 975

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/66 (21%), Positives = 36/66 (54%)
 Frame = +1

Query: 451 SQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEH 630
           SQ+  ++KE+  + EEL A  +     +  E+ R++ +   A+E + + +Q   +++  +
Sbjct: 459 SQYAEQLKEQVMEQEELIANARREYETLQSEMARIQQENESAKEEVKEVLQALEELTVNY 518

Query: 631 VKNAKE 648
            + ++E
Sbjct: 519 DQKSQE 524


>AY094959-1|AAM11312.1|  975|Drosophila melanogaster SD02406p
           protein.
          Length = 975

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/66 (21%), Positives = 36/66 (54%)
 Frame = +1

Query: 451 SQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEH 630
           SQ+  ++KE+  + EEL A  +     +  E+ R++ +   A+E + + +Q   +++  +
Sbjct: 459 SQYAEQLKEQVMEQEELIANARREYETLQSEMARIQQENESAKEEVKEVLQALEELAVNY 518

Query: 631 VKNAKE 648
            + ++E
Sbjct: 519 DQKSQE 524


>AE013599-2234|AAF58029.1|  975|Drosophila melanogaster CG7765-PA
           protein.
          Length = 975

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/66 (21%), Positives = 36/66 (54%)
 Frame = +1

Query: 451 SQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEH 630
           SQ+  ++KE+  + EEL A  +     +  E+ R++ +   A+E + + +Q   +++  +
Sbjct: 459 SQYAEQLKEQVMEQEELIANARREYETLQSEMARIQQENESAKEEVKEVLQALEELAVNY 518

Query: 631 VKNAKE 648
            + ++E
Sbjct: 519 DQKSQE 524


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,526,242
Number of Sequences: 53049
Number of extensions: 665383
Number of successful extensions: 1715
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6458274285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)