Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F07.2
         (1215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.3  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    24   3.1  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    24   3.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   3.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   7.1  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   9.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   9.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 307 NIIENAPPETPSTNQDEISDKCLS 378
           N  +NA   TP    DE+ DK LS
Sbjct: 679 NTTQNASATTPPPQVDEVDDKELS 702


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 811 ELLKDTNIISTNPYNKMEVKLAY*SSYL-LNKYNIMYLP 924
           E  K+T IIS+N YN       Y S  L  N  NI  +P
Sbjct: 296 ERSKETKIISSNNYNYKNYNNNYNSKKLYYNIINIEQIP 334


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 811 ELLKDTNIISTNPYNKMEVKLAY*SSYL-LNKYNIMYLP 924
           E  K+T IIS+N YN       Y S  L  N  NI  +P
Sbjct: 307 ERSKETKIISSNNYNYKNYNNNYNSKKLYYNIINIEQIP 345


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 557 FNLIISSSTSRIEPF 513
           FN+IIS  T RI P+
Sbjct: 368 FNIIISEPTERISPY 382


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 129 YCRIKKFCEFTLNSTV 82
           YC I K CE + NST+
Sbjct: 86  YCGIGKECELSPNSTI 101


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 442 LLTSQFLNEIKEKTGQIEELTAFTKGSIRDVD 537
           ++T+QFLN++K+ +  +       K  I D D
Sbjct: 420 IVTAQFLNQLKKSSVLVHTKNGRLKYQISDND 451


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 771 TGSWI*SFCH 742
           TG+W+  FCH
Sbjct: 6   TGTWVGGFCH 15


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 543 NYEVKKSNHYCTRSHVKTN 599
           N E  K+NH+C +   K N
Sbjct: 58  NKEKSKNNHHCNQDTEKLN 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,511
Number of Sequences: 438
Number of extensions: 5427
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41572845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)