Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_F04.2
(1284 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 106 4e-23
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 87 2e-17
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 87 2e-17
03_01_0548 + 4099386-4099847,4100435-4101316 86 7e-17
03_01_0547 + 4093196-4093657,4094267-4095148 86 7e-17
03_01_0544 + 4082528-4082989,4083585-4084466 86 7e-17
03_01_0543 + 4076981-4077442,4078145-4079026 86 7e-17
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 42 8e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 37 0.030
02_04_0462 + 23131433-23132836 36 0.069
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 36 0.091
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 33 0.37
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 32 0.85
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 32 1.1
03_05_0788 + 27709563-27709832,27710101-27710887,27710947-277110... 31 2.0
07_03_1138 - 24240155-24240219,24240427-24240559,24240640-242411... 30 4.5
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 29 6.0
08_02_0321 - 15761468-15761512,15761573-15761673,15761854-157619... 29 6.0
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 106 bits (254), Expect = 4e-23
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +2
Query: 761 DAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGKTVXVG 940
DAGKST GGQI+ L+G VD RT++KYE+EA++KSRESWY+++ +DTN+EER KGKTV VG
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 941 RAYFEXEKXHLXFL 982
RA+FE E L
Sbjct: 64 RAHFETETTRFTIL 77
>04_04_1015 - 30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 87.4 bits (207), Expect = 2e-17
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 734 VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEER 913
+N+ +GHVD+GKST+ G+++ L G + K+ + K E+EA+EK + S+ +WA+D + EER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 914 DKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXKLTRCMVI 1054
++G T+ V AY E +K + L P K F M+ G + +++
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILV 355
>04_04_1008 - 30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 87.4 bits (207), Expect = 2e-17
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 734 VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEER 913
+N+ +GHVD+GKST+ G+++ L G + K+ + K E+EA+EK + S+ +WA+D + EER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 914 DKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXKLTRCMVI 1054
++G T+ V AY E +K + L P K F M+ G + +++
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILV 355
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ S+ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXKLTRCMVIXX*GNSKG 1078
+ ER++G T+ + FE K + + P + F M+ G + C V+ + G
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ-ADCAVLIIDSTTGG 122
Query: 1079 FE 1084
FE
Sbjct: 123 FE 124
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ S+ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXKLTRCMVIXX*GNSKG 1078
+ ER++G T+ + FE K + + P + F M+ G + C V+ + G
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ-ADCAVLIIDSTTGG 122
Query: 1079 FE 1084
FE
Sbjct: 123 FE 124
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ S+ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXKLTRCMVIXX*GNSKG 1078
+ ER++G T+ + FE K + + P + F M+ G + C V+ + G
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ-ADCAVLIIDSTTGG 122
Query: 1079 FE 1084
FE
Sbjct: 123 FE 124
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ S+ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXKLTRCMVIXX*GNSKG 1078
+ ER++G T+ + FE K + + P + F M+ G + C V+ + G
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ-ADCAVLIIDSTTGG 122
Query: 1079 FE 1084
FE
Sbjct: 123 FE 124
>04_04_1593 - 34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 42.3 bits (95), Expect = 8e-04
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 869 SWYLSWALDTNQEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGG 1024
S+ +WA+D + +ER++G T+ VG AYF+ + H+ L P K F M+ G
Sbjct: 280 SFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISG 332
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 37.1 bits (82), Expect = 0.030
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 737 NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRE 868
N I H+D GKST+ +++ LTG V KR +++ + + RE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQQFLDNMDLERE 122
>02_04_0462 + 23131433-23132836
Length = 467
Score = 35.9 bits (79), Expect = 0.069
Identities = 24/82 (29%), Positives = 35/82 (42%)
Frame = +2
Query: 725 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQ 904
K HVN+ IGHVD GK+T+ + + V +KY+ +D
Sbjct: 68 KPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE---------------IDAAP 112
Query: 905 EERDKGKTVXVGRAYFEXEKXH 970
EER +G T+ +E E H
Sbjct: 113 EERARGITINTATVEYETETRH 134
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 35.5 bits (78), Expect = 0.091
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 704 VEDTRSKKEHVNVVFIGHVDAG 769
VE+ + K H+NVVFIGHVD G
Sbjct: 97 VEEEKETKRHLNVVFIGHVDPG 118
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 725 KEHVNVVFIGHVDAGKSTIGG---QIMSLTGMVDKRTLEKYEREAREKSR 865
K HVNV IGHVD GK+T+ ++++ G ++ ++ EK+R
Sbjct: 65 KPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKAR 114
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 32.3 bits (70), Expect = 0.85
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 737 NVVFIGHVDAGKSTIGGQIMSLTGMVDK 820
N I HVD GKST+ +++ LTG + K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>02_03_0105 - 15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 893 DTNQEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGG 1024
D + + KGKTV VGRA+FE E L P K + M+ G
Sbjct: 7 DLSIKMEPKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISG 51
>03_05_0788 +
27709563-27709832,27710101-27710887,27710947-27711086,
27712209-27712442,27712782-27712847
Length = 498
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 761 DAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWY 877
+ GKS G+++ L G ++ L K +E E R WY
Sbjct: 436 EIGKSKALGRLIELVGPAERVKLTKVTKELHEAERHKWY 474
>07_03_1138 -
24240155-24240219,24240427-24240559,24240640-24241182,
24241306-24241411,24241630-24241727,24242289-24242516,
24242990-24243307,24243411-24243695,24243706-24243771,
24244337-24244738
Length = 747
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 710 DTRSKKEHVNVVFIGHVDAGKST-IGGQIMSLTGMVDKRTLEKYEREAREKSRESWY 877
DT S K + G D G+ G ++S + VD+ LEK+ER R+ R+SW+
Sbjct: 673 DTLSSKNSIK----GDHDQGERVEYSGPLLSQSHKVDE-LLEKHERHIRQVVRKSWF 724
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 665 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 835
+L+K K P + S++ +N+ IGHV GKST+ I + + K LE+
Sbjct: 38 DLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELER 94
>08_02_0321 -
15761468-15761512,15761573-15761673,15761854-15761950,
15762671-15762742,15762838-15762960,15763047-15763129,
15763269-15763410,15763496-15763654
Length = 273
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 756 CPINTTFTCSFLLRVSSTRGGFFFGIFFVNSPSSLGFV 643
C T+ TC+F L TR G FF ++F + S L FV
Sbjct: 27 CASATSNTCAFSLAEHLTREGMFFDLYF-RTQSYLRFV 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,078,492
Number of Sequences: 37544
Number of extensions: 407475
Number of successful extensions: 1295
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3992400636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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