Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_F04.2
(1284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 164 1e-40
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 89 8e-18
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 89 8e-18
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 86 6e-17
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 86 6e-17
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 86 6e-17
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 86 6e-17
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 70 3e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 33 0.44
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 33 0.44
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 33 0.44
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 2.3
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 29 5.4
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 29 5.4
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 29 7.1
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 29 7.1
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 9.4
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical protein
H19N07.1 protein.
Length = 532
Score = 164 bits (398), Expect = 1e-40
Identities = 81/134 (60%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
Frame = +2
Query: 629 TQVGNTNPNEDGELTKKIPKKKPPRVE-DTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLT 805
T+ P + +L + KK V D + KEH+N+VF+GHVDAGKSTIGGQ+M LT
Sbjct: 74 TEAPKKEPTPEEDLVAPLAKKFQRTVYVDDGTHKEHINMVFVGHVDAGKSTIGGQLMFLT 133
Query: 806 GMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGKTVXVGRAYFEXEKXHLXFL- 982
GMVDKRTLEKYEREA+EK RESWYLSW +DTN EER+KGKTV VGRAYFE EK H L
Sbjct: 134 GMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILD 193
Query: 983 MPLXKKFXSXMMGG 1024
P K F M+ G
Sbjct: 194 APGHKSFVPNMIVG 207
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein
K07A12.4b protein.
Length = 592
Score = 88.6 bits (210), Expect = 8e-18
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Frame = +2
Query: 680 IPKKKP-PRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREARE 856
+ +K P PRV D K+ +N++ +GHVDAGKST+ G ++ +VD RT++K++ EA
Sbjct: 156 VARKTPKPRVAD----KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAAR 211
Query: 857 KSRESWYLSWALDTNQEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXK 1033
+ S+ +W LD +EER++G T+ +GR FE + L P K F S M+ G +
Sbjct: 212 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271
Query: 1034 LTRCMVI 1054
+++
Sbjct: 272 ADAAILV 278
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein
K07A12.4a protein.
Length = 610
Score = 88.6 bits (210), Expect = 8e-18
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Frame = +2
Query: 680 IPKKKP-PRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREARE 856
+ +K P PRV D K+ +N++ +GHVDAGKST+ G ++ +VD RT++K++ EA
Sbjct: 174 VARKTPKPRVAD----KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAAR 229
Query: 857 KSRESWYLSWALDTNQEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGGXXK 1033
+ S+ +W LD +EER++G T+ +GR FE + L P K F S M+ G +
Sbjct: 230 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289
Query: 1034 LTRCMVI 1054
+++
Sbjct: 290 ADAAILV 296
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 85.8 bits (203), Expect = 6e-17
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + S+ +W LD
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGG 1024
+ ER++G T+ + FE K ++ + P + F M+ G
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 85.8 bits (203), Expect = 6e-17
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + S+ +W LD
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGG 1024
+ ER++G T+ + FE K ++ + P + F M+ G
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 85.8 bits (203), Expect = 6e-17
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + S+ +W LD
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGG 1024
+ ER++G T+ + FE K ++ + P + F M+ G
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 85.8 bits (203), Expect = 6e-17
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTN 901
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + S+ +W LD
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 902 QEERDKGKTVXVGRAYFEXEKXHLXFL-MPLXKKFXSXMMGG 1024
+ ER++G T+ + FE K ++ + P + F M+ G
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 70.1 bits (164), Expect = 3e-12
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +2
Query: 722 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALD 895
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + S+ +W LD
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 725 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 841
K H+NV IGHVD GK+T+ I + KYE
Sbjct: 47 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 85
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 725 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 841
K H+NV IGHVD GK+T+ I + KYE
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 725 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 841
K H+NV IGHVD GK+T+ I + KYE
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 698 PRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 835
P E+ S++ +N+ IGHV GKST+ + + KR LE+
Sbjct: 29 PLTEEVISRQATINIGTIGHVAHGKSTLVKAFSGVHTVKFKRELER 74
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 665 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 835
E+ K++ KKK ++E T V+ +G ++GKST+ Q+ ++TG K L +
Sbjct: 22 EIEKQLEKKKNMQLEQT--------VLLLGPGESGKSTVMKQMRAMTGNYTKTELHE 70
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 665 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 835
E+ K++ KKK ++E T V+ +G ++GKST+ Q+ ++TG K L +
Sbjct: 22 EIEKQLEKKKNMQLEQT--------VLLLGPGESGKSTVMKQMRAMTGNYTKTELHE 70
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 737 NVVFIGHVDAGKSTIGGQIMSLTGMV---DKRTLEKYEREAREK 859
N + HVD GKST+ +++ + G V K+ L+K + E RE+
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVE-RER 86
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 737 NVVFIGHVDAGKSTIGGQIMSLTGMV 814
N+ I HVDAGK+T+ +++ L G +
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 728 EHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 835
EH+ NV + HVD GK++ ++S ++ R K
Sbjct: 18 EHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGK 54
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 728 EHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 835
EH+ NV + HVD GK++ ++S ++ R K
Sbjct: 18 EHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGK 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,511,667
Number of Sequences: 27780
Number of extensions: 333593
Number of successful extensions: 1238
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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