Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F02.2
         (1275 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14710-4|AAK84537.3|  526|Caenorhabditis elegans Hypothetical pr...    69   9e-12
U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical pr...    61   2e-09
U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical p...    54   2e-07
AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical ...    54   2e-07
AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical ...    54   3e-07
Z92825-2|CAB07315.1|  266|Caenorhabditis elegans Hypothetical pr...    34   0.25 
U64847-6|AAB04875.1|  380|Caenorhabditis elegans Hypothetical pr...    30   4.0  

>L14710-4|AAK84537.3|  526|Caenorhabditis elegans Hypothetical
           protein K02D10.1a protein.
          Length = 526

 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
 Frame = +1

Query: 292 LQQRGQPVNFVSNXSLRSSANYXAQFKAASIDN-GFERLIIPSIAVAEYLKSVT---FNK 459
           L+   + V  ++N S ++   Y  + +     + G   +I P+I +A+YLKS       +
Sbjct: 44  LEDPSKKVFVLTNNSTKTLEQYMKKIEKLGFGHLGRNNVISPAIVLADYLKSNADKFSGE 103

Query: 460 TVYCVTCTEXKXVLEAHG-FKC-KEGPDLGPEYY-GEYIQYLEDDEEIGAVVFDSDFKIN 630
            VY +     K  LE  G  KC   GPD   ++  G++I  ++      AVV   D   +
Sbjct: 104 YVYLIGTENLKATLENDGGVKCFGTGPDSIRDHTDGDFIHKVDMSIAPKAVVCSYDAHFS 163

Query: 631 LPKMYRAITYLKRPEVLFINGATDRMVPMKXXXXXXXXXXXXXXXXXEVK-REPVLLGKP 807
            PK+ +A  YL+ P V ++    D   P                    V  R+P + GKP
Sbjct: 164 YPKIMKASNYLQDPSVEYLVTNQDYTFPGPVPGVVIPGSGATSAAVTAVTGRDPKVFGKP 223

Query: 808 GRVFGEFAMKRAGITDPSRVLFIGDMIAQDVSLGKAVG 921
            +   +F ++RA + DP R +  GD +  D+  G A G
Sbjct: 224 HKPMADFLLRRAHV-DPKRTVMFGDRLDTDIMFGNANG 260


>U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical
           protein C45E5.1 protein.
          Length = 303

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 62/223 (27%), Positives = 92/223 (41%), Gaps = 12/223 (5%)
 Frame = +1

Query: 313 VNFVSNXSLRSSANYXAQFKAASIDN-GFERLIIPSIAVAEYLK--SVTF-NKTVYCVTC 480
           V   +N S ++   Y  + K       G E L+ P+I + +Y K  S  F N+ +Y +  
Sbjct: 51  VFITTNNSTKTLEQYMKKVKKMRFGRLGRENLLSPTIVLCDYFKQNSDKFENQYIYLIGV 110

Query: 481 TEXKXVLE-AHGFKC-KEGPDLGPEYY-GEYIQYLEDDEEIG-AVVFDSDFKINLPKMYR 648
              K  LE   G KC   GPD    Y  G++I  ++   +I  AVV   D   + PK+ +
Sbjct: 111 ENLKKSLEEGGGVKCFGTGPDHKDNYTDGDFINEVDVKSKIPKAVVVSFDSHFSYPKLMK 170

Query: 649 AITYLKRPEVLFINGATDRMVPMKXXXXXXXXXXXXXXXXXEVK-REP-VLLGKPGRVFG 822
           A  +L  P V F+    D   P                    V  R+P ++ GKP     
Sbjct: 171 AANFLADPLVEFLVCNEDSTFPGPVPGMILPETGPWSAAIQNVSGRKPDIVFGKPHEQLA 230

Query: 823 EFAMKR--AGITDPSRVLFIGDMIAQDVSLGKAVGFNTLLVLT 945
            F   R  AG  +  R +  GD +  D+  GK  GF T+ + T
Sbjct: 231 NFLKSRVQAGKFNSERTVMFGDRLDTDMMFGKNNGFTTVWMQT 273


>U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical
           protein K09H11.7 protein.
          Length = 322

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 9/240 (3%)
 Frame = +1

Query: 253 QASLPRVGAFFKQLQQRGQPVNFVSNXSLRSSANYXAQFKAASIDNGF---ERLIIPSIA 423
           ++ +P        L +  + +  ++N + +S A Y  +      ++       L+ P+  
Sbjct: 44  ESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNNLVNPAAV 103

Query: 424 VAEYLKSVTFN-KTVYCVTCTEXKXVLEAHGFKC-KEGPDLGPEYY---GEYIQYLEDDE 588
           VA+ L     + K VY +     +  ++  G +    GP+   +     G ++  ++ +E
Sbjct: 104 VADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPEKKQDEADGSGAFMYDIKLEE 163

Query: 589 EIGAVVFDSDFKINLPKMYRAITYLKRPEVLFINGATDRMVP-MKXXXXXXXXXXXXXXX 765
            +GAVV   +   +  KM +A  YL+   VLF+    D   P                  
Sbjct: 164 NVGAVVVGYEKHFDYVKMMKASNYLREEGVLFVATNEDETCPGPNPEVVIPDAGPIVAAI 223

Query: 766 XXEVKREPVLLGKPGRVFGEFAMKRAGITDPSRVLFIGDMIAQDVSLGKAVGFNTLLVLT 945
                R+P+ +GKP      + +KR    +PSR + IGD    DV  G+  G  TLLVL+
Sbjct: 224 KCASGRDPLTVGKPCTPAFNY-IKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLVLS 282


>AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical
           protein C53A3.2 protein.
          Length = 349

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 9/240 (3%)
 Frame = +1

Query: 253 QASLPRVGAFFKQLQQRGQPVNFVSNXSLRSSANYXAQFKAASIDNGF---ERLIIPSIA 423
           ++ +P        L +  + +  ++N + +S A Y  +      ++       L+ P+  
Sbjct: 71  ESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNNLVNPAAV 130

Query: 424 VAEYLKSVTFN-KTVYCVTCTEXKXVLEAHGFKC-KEGPDLGPEYY---GEYIQYLEDDE 588
           VA+ L     + K VY +     +  ++  G +    GP+   +     G ++  ++ +E
Sbjct: 131 VADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPEKKQDEADGSGAFMYDIKLEE 190

Query: 589 EIGAVVFDSDFKINLPKMYRAITYLKRPEVLFINGATDRMVP-MKXXXXXXXXXXXXXXX 765
            +GAVV   +   +  KM +A  YL+   VLF+    D   P                  
Sbjct: 191 NVGAVVVGYEKHFDYVKMMKASNYLREEGVLFVATNEDETCPGPNPEVVIPDAGPIVAAI 250

Query: 766 XXEVKREPVLLGKPGRVFGEFAMKRAGITDPSRVLFIGDMIAQDVSLGKAVGFNTLLVLT 945
                R+P+ +GKP      + +KR    +PSR + IGD    DV  G+  G  TLLVL+
Sbjct: 251 KCASGRDPLTVGKPCTPAFNY-IKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLVLS 309


>AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical
           protein F44E7.2 protein.
          Length = 335

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 9/240 (3%)
 Frame = +1

Query: 253 QASLPRVGAFFKQLQQRGQPVNFVSNXSLRSSANYXAQFKAASIDNGF---ERLIIPSIA 423
           ++ +P        L +  + +  ++N + +S A Y  +      ++       L+ P+  
Sbjct: 61  ESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNNLVNPAAV 120

Query: 424 VAEYLKSVTFN-KTVYCVTCTEXKXVLEAHGFKC-KEGPDLGPEYY---GEYIQYLEDDE 588
           VA+ L     + K VY +     +  ++  G +    GP+   +     G ++  ++ +E
Sbjct: 121 VADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPEKKQDEADGSGAFMYDIKLEE 180

Query: 589 EIGAVVFDSDFKINLPKMYRAITYLKRPEVLFINGATDRMVP-MKXXXXXXXXXXXXXXX 765
            +GAVV   +   +  KM +A  YL+   VLF+    D   P                  
Sbjct: 181 NVGAVVVGYEKHFDYIKMMKASNYLREEGVLFVATNEDETCPGPNPEVVIPDAGPIVAAI 240

Query: 766 XXEVKREPVLLGKPGRVFGEFAMKRAGITDPSRVLFIGDMIAQDVSLGKAVGFNTLLVLT 945
                R+P+ +GKP      + +KR    +PSR + IGD    DV  G+  G  TLLVL+
Sbjct: 241 KCASGRDPLTVGKPCTPAFNY-IKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLVLS 299


>Z92825-2|CAB07315.1|  266|Caenorhabditis elegans Hypothetical
           protein C13C4.4 protein.
          Length = 266

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +1

Query: 784 EPVLLGKPGRVFGEFAMKRAGITDPSRVLFIGDMIAQDVSLGKAVGFNTLLVLTNTTKEE 963
           E + +GKP R + E  M   G+  P  ++ +GD +  DV   +A G   + V T   + +
Sbjct: 179 EVLNIGKPSRFYFEQGMNALGM-KPEEIVMVGDDLMSDVGGAQACGMRGVQVRTGKWRPD 237

Query: 964 MLSHTIRXDTT 996
                +  D T
Sbjct: 238 FEKMPVTPDLT 248


>U64847-6|AAB04875.1|  380|Caenorhabditis elegans Hypothetical
           protein F08F3.8 protein.
          Length = 380

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 379 SIDNGFERLIIPSIAVAEYLK 441
           +IDNGFE++++P +  A Y K
Sbjct: 50  AIDNGFEQILVPKVCAANYDK 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,776,674
Number of Sequences: 27780
Number of extensions: 377658
Number of successful extensions: 884
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)