Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_F01.2
         (1276 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial ...    63   9e-10
BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p pro...    63   9e-10
AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA...    63   9e-10
BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p pro...    56   8e-08
AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA...    56   8e-08

>X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial
           ATPase couplingfactor 6 subunit protein.
          Length = 106

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = +3

Query: 192 DPIQQLFLAKIREXKQKRAGGKVPXASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLK 371
           DPIQQLFL K+RE KQK AGGK+  ++P +             Q+G     DM  FP  +
Sbjct: 33  DPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDMLKFPEFQ 92

Query: 372 FEEPKLDPIDE 404
           F + K+DPI +
Sbjct: 93  FPDVKVDPITQ 103


>BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p
           protein.
          Length = 106

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = +3

Query: 192 DPIQQLFLAKIREXKQKRAGGKVPXASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLK 371
           DPIQQLFL K+RE KQK AGGK+  ++P +             Q+G     DM  FP  +
Sbjct: 33  DPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDMLKFPEFQ 92

Query: 372 FEEPKLDPIDE 404
           F + K+DPI +
Sbjct: 93  FPDVKVDPITQ 103


>AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA
           protein.
          Length = 106

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = +3

Query: 192 DPIQQLFLAKIREXKQKRAGGKVPXASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLK 371
           DPIQQLFL K+RE KQK AGGK+  ++P +             Q+G     DM  FP  +
Sbjct: 33  DPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDMLKFPEFQ 92

Query: 372 FEEPKLDPIDE 404
           F + K+DPI +
Sbjct: 93  FPDVKVDPITQ 103


>BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p
           protein.
          Length = 159

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 28/76 (36%), Positives = 35/76 (46%)
 Frame = +3

Query: 192 DPIQQLFLAKIREXKQKRAGGKVPXASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLK 371
           DPI Q+FL K+RE + K   GK     P               QYGGG G+DM  FP  K
Sbjct: 38  DPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGEGVDMLEFPKFK 97

Query: 372 FEEPKLDPIDEQAAPK 419
             +  +DPI     P+
Sbjct: 98  LPDIDIDPISVDDLPE 113


>AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA
           protein.
          Length = 147

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 28/76 (36%), Positives = 35/76 (46%)
 Frame = +3

Query: 192 DPIQQLFLAKIREXKQKRAGGKVPXASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLK 371
           DPI Q+FL K+RE + K   GK     P               QYGGG G+DM  FP  K
Sbjct: 26  DPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGEGVDMLEFPKFK 85

Query: 372 FEEPKLDPIDEQAAPK 419
             +  +DPI     P+
Sbjct: 86  LPDIDIDPISVDDLPE 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,702,516
Number of Sequences: 53049
Number of extensions: 415842
Number of successful extensions: 2416
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2210
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6865736385
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)