Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_E23.2
         (1223 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p...    31   2.2  
U80436-4|AAC71111.1|  552|Caenorhabditis elegans Uncoordinated p...    31   2.2  
U80436-3|AAL06029.3|  633|Caenorhabditis elegans Uncoordinated p...    31   2.2  
U80436-2|AAC71110.1|  928|Caenorhabditis elegans Uncoordinated p...    31   2.2  
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p...    31   2.2  
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle...    31   2.2  
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    30   3.8  
Z54269-1|CAA91022.2|  815|Caenorhabditis elegans Hypothetical pr...    29   6.7  
Z49967-3|CAA90249.1|   81|Caenorhabditis elegans Hypothetical pr...    29   6.7  

>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
            protein 73, isoform f protein.
          Length = 2140

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 636  RIARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIG 812
            R+   D+S+    K + +GTL ISE +  +  K  +R I    ++++    + P+++ G
Sbjct: 1992 RLQNFDKSLSAQGKLIHQGTLQISESIAGNVQKPKDRRIFLFEQSAIIADHIPPKKEFG 2050


>U80436-4|AAC71111.1|  552|Caenorhabditis elegans Uncoordinated
           protein 73, isoform d protein.
          Length = 552

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 636 RIARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIG 812
           R+   D+S+    K + +GTL ISE +  +  K  +R I    ++++    + P+++ G
Sbjct: 346 RLQNFDKSLSAQGKLIHQGTLQISESIAGNVQKPKDRRIFLFEQSAIIADHIPPKKEFG 404


>U80436-3|AAL06029.3|  633|Caenorhabditis elegans Uncoordinated
           protein 73, isoform e protein.
          Length = 633

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 636 RIARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIG 812
           R+   D+S+    K + +GTL ISE +  +  K  +R I    ++++    + P+++ G
Sbjct: 427 RLQNFDKSLSAQGKLIHQGTLQISESIAGNVQKPKDRRIFLFEQSAIIADHIPPKKEFG 485


>U80436-2|AAC71110.1|  928|Caenorhabditis elegans Uncoordinated
           protein 73, isoform c protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 636 RIARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIG 812
           R+   D+S+    K + +GTL ISE +  +  K  +R I    ++++    + P+++ G
Sbjct: 432 RLQNFDKSLSAQGKLIHQGTLQISESIAGNVQKPKDRRIFLFEQSAIIADHIPPKKEFG 490


>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
            protein 73, isoform a protein.
          Length = 2488

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 636  RIARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIG 812
            R+   D+S+    K + +GTL ISE +  +  K  +R I    ++++    + P+++ G
Sbjct: 1992 RLQNFDKSLSAQGKLIHQGTLQISESIAGNVQKPKDRRIFLFEQSAIIADHIPPKKEFG 2050


>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
            exchange factorUNC-73A protein.
          Length = 2488

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 636  RIARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIG 812
            R+   D+S+    K + +GTL ISE +  +  K  +R I    ++++    + P+++ G
Sbjct: 1992 RLQNFDKSLSAQGKLIHQGTLQISESIAGNVQKPKDRRIFLFEQSAIIADHIPPKKEFG 2050


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 613 TCLSNFFTTGTVTGKLSANFSGVHSSGCVVAKCLICSFSLQVNKLGIFC 467
           +C S  F     TGK    F  V+S  C + +C     S+Q   +GI C
Sbjct: 578 SCPSGGFAISMCTGKCGTGFECVNSGCCSLPRCPSGLMSVQRCAMGIGC 626


>Z54269-1|CAA91022.2|  815|Caenorhabditis elegans Hypothetical
           protein F02C12.1 protein.
          Length = 815

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 777 KKIDVTPEEKIGEFENIIRRCAAKENSDQKTFKQDYNATKENEGEKMEKAXGITKESH 950
           K I  T +EKI ++ + ++    K+  DQK  +   N   +    KM+      K+ H
Sbjct: 543 KLIQQTTQEKINDYRDTLKTAEDKQQFDQKINENMKNTEGQQGNSKMKANLETIKDIH 600


>Z49967-3|CAA90249.1|   81|Caenorhabditis elegans Hypothetical
           protein F54C9.3 protein.
          Length = 81

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
 Frame = +3

Query: 771 SVKKIDVTPEEKI-GEFENI--IRRCAAKENSDQKTFK--QDYNATKENEGE-KMEKAXG 932
           S KK+D+TP+E + GE+ N+   R   A   S +K ++  QD+    E   E K +K   
Sbjct: 2   STKKLDMTPDEVVEGEYVNVGRSRSATATSTSSRKDYETLQDFLKRDEYSAETKRDKFKT 61

Query: 933 ITKES 947
           +  +S
Sbjct: 62  VQVQS 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,534,245
Number of Sequences: 27780
Number of extensions: 374521
Number of successful extensions: 1071
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3380764392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)