Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_E21.2
(1254 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 101 1e-21
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 2.3
AF047663-3|AAC04452.1| 137|Caenorhabditis elegans Hypothetical ... 30 3.0
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 29 5.2
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 29 5.2
Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 9.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 9.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 9.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 9.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 9.1
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 101 bits (241), Expect = 1e-21
Identities = 41/101 (40%), Positives = 63/101 (62%)
Frame = +3
Query: 726 IRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVCMFPLWPATVRIGVYYL 905
++L +H Q F+D D YVW++DP P + G+L++ GTI C+FPLWP +R GVYY+
Sbjct: 160 VKLLVHEVQAFVDDKDVYVWVFDPTPLMKKIIGVLMLVGTIVGCLFPLWPVWLRQGVYYV 219
Query: 906 SIAAXAFLVMIIGLTVLRVVVFCLVWILTXSRHHLWLLXTL 1028
SI II +LR ++F +++ +T +H LW+L L
Sbjct: 220 SITGIGCFAAIIVTAILRTILFGIIYAVTFGKHKLWVLPNL 260
Score = 58.0 bits (134), Expect = 1e-08
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 354 VAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA--TGKNPAFTTRIEVTHYLHR 527
+AK+++ N PT T F + V YF+G KAVD L SK+ K+ F TR + HY+
Sbjct: 24 IAKYIRFNCPTATTMFEGNEVHYFSGNKAVDTLWESKYGNKAKKDAMFKTRDDCFHYICE 83
Query: 528 MLLHKLFHRAKKV 566
+ +LF RAKK+
Sbjct: 84 LNSKQLFFRAKKL 96
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +1
Query: 559 RRSL*ASKN*KVNQKRRNPRRSVRAAMKRMERKAK--PAPAR 678
RRS ASK+ ++RR+P +S A KR + ++K PAPAR
Sbjct: 305 RRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPAR 346
>AF047663-3|AAC04452.1| 137|Caenorhabditis elegans Hypothetical
protein W09G12.9 protein.
Length = 137
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 897 YYLSIAAXAFLVMIIGLTVLRVVVFCLVWIL 989
Y+ +I +V+++ L VVVFCL+W+L
Sbjct: 3 YFSTITNELAVVLLLIAAALLVVVFCLIWML 33
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 29.5 bits (63), Expect = 5.2
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 363 WLKANVPTKKTKFL--NHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRMLL 536
WLK +KKTKFL N + YFT +K S K P F+ +I+ T R L
Sbjct: 298 WLKMLQKSKKTKFLQKNGNFTYFT-SKNSQIYRFSAQIPPKIPNFSFQIDQTKLTRRQRL 356
Query: 537 HKLFHRA 557
+ + A
Sbjct: 357 TLMLNNA 363
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 980 DQTEDDHXEHGQPYYHHEESXRRYAQVIYSYPNSGRPEWEHANC 849
DQT D+H + GQ HEE +Q YS+ +S P + C
Sbjct: 3126 DQTNDEHFDFGQEDSEHEELKHCSSQ--YSFDSSLPPFHRYVAC 3167
>Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical
protein ZC410.7c protein.
Length = 307
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 763 IQSMLTSGFTIRSPGTTGSAGFWSSLER 846
I+ + T GF I++ G T + G W S ER
Sbjct: 186 IKQLATEGFGIKNVGRTANTGVWVSNER 213
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 CTNEEDKISKSPRGIFHRYKGCRCLVD 457
C E +IS SPR + +KGC+ LVD
Sbjct: 5410 CVTFECEISGSPRPEYRWFKGCKELVD 5436
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 CTNEEDKISKSPRGIFHRYKGCRCLVD 457
C E +IS SPR + +KGC+ LVD
Sbjct: 5939 CVTFECEISGSPRPEYRWFKGCKELVD 5965
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 CTNEEDKISKSPRGIFHRYKGCRCLVD 457
C E +IS SPR + +KGC+ LVD
Sbjct: 5620 CVTFECEISGSPRPEYRWFKGCKELVD 5646
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 CTNEEDKISKSPRGIFHRYKGCRCLVD 457
C E +IS SPR + +KGC+ LVD
Sbjct: 5410 CVTFECEISGSPRPEYRWFKGCKELVD 5436
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 CTNEEDKISKSPRGIFHRYKGCRCLVD 457
C E +IS SPR + +KGC+ LVD
Sbjct: 5939 CVTFECEISGSPRPEYRWFKGCKELVD 5965
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 CTNEEDKISKSPRGIFHRYKGCRCLVD 457
C E +IS SPR + +KGC+ LVD
Sbjct: 5620 CVTFECEISGSPRPEYRWFKGCKELVD 5646
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 CTNEEDKISKSPRGIFHRYKGCRCLVD 457
C E +IS SPR + +KGC+ LVD
Sbjct: 4829 CVTFECEISGSPRPEYRWFKGCKELVD 4855
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,192,783
Number of Sequences: 27780
Number of extensions: 434610
Number of successful extensions: 1331
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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