Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_E17.2
(1320 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S79862-1|AAB35397.1| 504|Homo sapiens 26 S protease subunit 5b ... 82 5e-15
BC014478-1|AAH14478.1| 504|Homo sapiens proteasome (prosome, ma... 82 5e-15
AL161911-7|CAI95118.1| 504|Homo sapiens proteasome (prosome, ma... 82 5e-15
D31889-1|BAA06687.1| 503|Homo sapiens KIAA0072 protein. 81 7e-15
BC050356-1|AAH50356.2| 192|Homo sapiens RNF212 protein protein. 32 5.4
BC101260-1|AAI01261.1| 297|Homo sapiens RNF212 protein protein. 31 7.1
BC101259-1|AAI01260.1| 232|Homo sapiens ring finger protein 212... 31 7.1
BC101258-1|AAI01259.1| 232|Homo sapiens ring finger protein 212... 31 7.1
AK096160-1|BAC04714.1| 232|Homo sapiens protein ( Homo sapiens ... 31 7.1
>S79862-1|AAB35397.1| 504|Homo sapiens 26 S protease subunit 5b
protein.
Length = 504
Score = 81.8 bits (193), Expect = 5e-15
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 8/275 (2%)
Frame = +1
Query: 181 VAXQLXXLITSLQTDEXIPSAMNQLKTLLVSAP-TEISETILEVGLSKILQCFNIFDRHL 357
+A Q L+ + E + L ++L + P E+ + E+ L + N R
Sbjct: 1 MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREK 60
Query: 358 VDLICEVLTLCFEKFSPGEVIKSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSNALPI 537
L +L + P V ++ + L H + V+ L + +I + V +S I
Sbjct: 61 TTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEI 120
Query: 538 PQYIDVYVAVGQLVGDNDIGVANKAI-------LITSNLPEEAYTKVLEEMKILLQYSSS 696
++ + +G ++ VA AI L + L + +L+++K +++ +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 180
Query: 697 SKCNVFEVIINISIKSYDLFKICLELGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYG 876
+ V+E+II IS S + C G + +++E+ DVL + +E++++LA +G
Sbjct: 181 VRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 240
Query: 877 INYLLNSGAMDKXVTVVIDLKTSPVGGILIPGYMK 981
YL G +D+ +++ + P +PG++K
Sbjct: 241 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVK 275
>BC014478-1|AAH14478.1| 504|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 5 protein.
Length = 504
Score = 81.8 bits (193), Expect = 5e-15
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 8/275 (2%)
Frame = +1
Query: 181 VAXQLXXLITSLQTDEXIPSAMNQLKTLLVSAP-TEISETILEVGLSKILQCFNIFDRHL 357
+A Q L+ + E + L ++L + P E+ + E+ L + N R
Sbjct: 1 MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREK 60
Query: 358 VDLICEVLTLCFEKFSPGEVIKSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSNALPI 537
L +L + P V ++ + L H + V+ L + +I + V +S I
Sbjct: 61 TTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEI 120
Query: 538 PQYIDVYVAVGQLVGDNDIGVANKAI-------LITSNLPEEAYTKVLEEMKILLQYSSS 696
++ + +G ++ VA AI L + L + +L+++K +++ +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 180
Query: 697 SKCNVFEVIINISIKSYDLFKICLELGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYG 876
+ V+E+II IS S + C G + +++E+ DVL + +E++++LA +G
Sbjct: 181 VRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 240
Query: 877 INYLLNSGAMDKXVTVVIDLKTSPVGGILIPGYMK 981
YL G +D+ +++ + P +PG++K
Sbjct: 241 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVK 275
>AL161911-7|CAI95118.1| 504|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 5 protein.
Length = 504
Score = 81.8 bits (193), Expect = 5e-15
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 8/275 (2%)
Frame = +1
Query: 181 VAXQLXXLITSLQTDEXIPSAMNQLKTLLVSAP-TEISETILEVGLSKILQCFNIFDRHL 357
+A Q L+ + E + L ++L + P E+ + E+ L + N R
Sbjct: 1 MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREK 60
Query: 358 VDLICEVLTLCFEKFSPGEVIKSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSNALPI 537
L +L + P V ++ + L H + V+ L + +I + V +S I
Sbjct: 61 TTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEI 120
Query: 538 PQYIDVYVAVGQLVGDNDIGVANKAI-------LITSNLPEEAYTKVLEEMKILLQYSSS 696
++ + +G ++ VA AI L + L + +L+++K +++ +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDI 180
Query: 697 SKCNVFEVIINISIKSYDLFKICLELGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYG 876
+ V+E+II IS S + C G + +++E+ DVL + +E++++LA +G
Sbjct: 181 VRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHG 240
Query: 877 INYLLNSGAMDKXVTVVIDLKTSPVGGILIPGYMK 981
YL G +D+ +++ + P +PG++K
Sbjct: 241 RQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVK 275
>D31889-1|BAA06687.1| 503|Homo sapiens KIAA0072 protein.
Length = 503
Score = 81.4 bits (192), Expect = 7e-15
Identities = 58/274 (21%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Frame = +1
Query: 184 AXQLXXLITSLQTDEXIPSAMNQLKTLLVSAP-TEISETILEVGLSKILQCFNIFDRHLV 360
A Q L+ + E + L ++L + P E+ + E+ L + N R
Sbjct: 1 AAQALALLREVARLEAPLEELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREKT 60
Query: 361 DLICEVLTLCFEKFSPGEVIKSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSNALPIP 540
L +L + P V ++ + L H + V+ L + +I + V +S I
Sbjct: 61 TLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEIL 120
Query: 541 QYIDVYVAVGQLVGDNDIGVANKAI-------LITSNLPEEAYTKVLEEMKILLQYSSSS 699
++ + +G ++ VA AI L + L + +L+++K +++ +
Sbjct: 121 NNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDIV 180
Query: 700 KCNVFEVIINISIKSYDLFKICLELGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYGI 879
+ V+E+II IS S + C G + +++E+ DVL + +E++++LA +G
Sbjct: 181 RYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHGR 240
Query: 880 NYLLNSGAMDKXVTVVIDLKTSPVGGILIPGYMK 981
YL G +D+ +++ + P +PG++K
Sbjct: 241 QYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVK 274
>BC050356-1|AAH50356.2| 192|Homo sapiens RNF212 protein protein.
Length = 192
Score = 31.9 bits (69), Expect = 5.4
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +1
Query: 787 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKXVTVVIDLKTSPV 951
+ ++++QS+ Q + S+++ KP+G +S A D+ ++ +DL SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLQPHSSAPDRLESMEVDLSPSPI 168
>BC101260-1|AAI01261.1| 297|Homo sapiens RNF212 protein protein.
Length = 297
Score = 31.5 bits (68), Expect = 7.1
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +1
Query: 787 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKXVTVVIDLKTSPV 951
+ ++++QS+ Q + S+++ KP+G +S A D+ ++ +DL SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168
>BC101259-1|AAI01260.1| 232|Homo sapiens ring finger protein 212
protein.
Length = 232
Score = 31.5 bits (68), Expect = 7.1
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +1
Query: 787 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKXVTVVIDLKTSPV 951
+ ++++QS+ Q + S+++ KP+G +S A D+ ++ +DL SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168
>BC101258-1|AAI01259.1| 232|Homo sapiens ring finger protein 212
protein.
Length = 232
Score = 31.5 bits (68), Expect = 7.1
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +1
Query: 787 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKXVTVVIDLKTSPV 951
+ ++++QS+ Q + S+++ KP+G +S A D+ ++ +DL SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168
>AK096160-1|BAC04714.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ38841 fis, clone MESAN2003529. ).
Length = 232
Score = 31.5 bits (68), Expect = 7.1
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +1
Query: 787 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKXVTVVIDLKTSPV 951
+ ++++QS+ Q + S+++ KP+G +S A D+ ++ +DL SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,972,727
Number of Sequences: 237096
Number of extensions: 2758729
Number of successful extensions: 4487
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4487
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 19101041810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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