Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_E16.2
         (1305 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L77213-1|AAC37593.1|  192|Homo sapiens phosphomevalonate kinase ...    38   0.11 
CR541998-1|CAG46795.1|  192|Homo sapiens PMVK protein.                 38   0.11 
BT019976-1|AAV38779.1|  192|Homo sapiens phosphomevalonate kinas...    38   0.11 
BC007694-1|AAH07694.1|  192|Homo sapiens phosphomevalonate kinas...    38   0.11 
BC006089-1|AAH06089.1|  192|Homo sapiens phosphomevalonate kinas...    38   0.11 
AL451085-1|CAI13237.1|  192|Homo sapiens phosphomevalonate kinas...    38   0.11 

>L77213-1|AAC37593.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score = 37.5 bits (83), Expect = 0.11
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 250 PKIILLFSGKRKSGKXFLTDHL 315
           P+++LLFSGKRKSGK F+T+ L
Sbjct: 8   PRLVLLFSGKRKSGKDFVTEAL 29


>CR541998-1|CAG46795.1|  192|Homo sapiens PMVK protein.
          Length = 192

 Score = 37.5 bits (83), Expect = 0.11
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 250 PKIILLFSGKRKSGKXFLTDHL 315
           P+++LLFSGKRKSGK F+T+ L
Sbjct: 8   PRLVLLFSGKRKSGKDFVTEAL 29


>BT019976-1|AAV38779.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score = 37.5 bits (83), Expect = 0.11
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 250 PKIILLFSGKRKSGKXFLTDHL 315
           P+++LLFSGKRKSGK F+T+ L
Sbjct: 8   PRLVLLFSGKRKSGKDFVTEAL 29


>BC007694-1|AAH07694.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score = 37.5 bits (83), Expect = 0.11
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 250 PKIILLFSGKRKSGKXFLTDHL 315
           P+++LLFSGKRKSGK F+T+ L
Sbjct: 8   PRLVLLFSGKRKSGKDFVTEAL 29


>BC006089-1|AAH06089.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score = 37.5 bits (83), Expect = 0.11
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 250 PKIILLFSGKRKSGKXFLTDHL 315
           P+++LLFSGKRKSGK F+T+ L
Sbjct: 8   PRLVLLFSGKRKSGKDFVTEAL 29


>AL451085-1|CAI13237.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score = 37.5 bits (83), Expect = 0.11
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 250 PKIILLFSGKRKSGKXFLTDHL 315
           P+++LLFSGKRKSGK F+T+ L
Sbjct: 8   PRLVLLFSGKRKSGKDFVTEAL 29


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,279,881
Number of Sequences: 237096
Number of extensions: 2929391
Number of successful extensions: 3267
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3267
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18825810660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)