Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_E14.2
         (1321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0506 + 34402494-34403102                                         44   2e-04
11_05_0096 - 19029632-19029937,19030376-19031197                       31   2.0  
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558...    31   2.7  
10_01_0094 - 1142271-1142570,1142658-1143458                           29   8.2  
09_02_0562 - 10687827-10688126,10688228-10689022                       29   8.2  

>03_06_0506 + 34402494-34403102
          Length = 202

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
 Frame = +3

Query: 711 LEVGSGSGVVVTAFGMAF----PSTFCISTDINFRACIMSKKTAEYNKVIFDSVRMDLAS 878
           +E+G GSG V+T+  +        T  ++TDIN  A   ++ T E + V  D +  D+ S
Sbjct: 1   MEIGCGSGYVITSLAIMLRQLGSGTQYLATDINQHAVETTQATLEAHGVHADVIATDIVS 60

Query: 879 SFAXXXXXXXXXXXX---YVVTDSEECGGXDITXSWAGGVXG 995
                             YV T  EE     I  SWAGG+ G
Sbjct: 61  GLEKRLHGLVDVVVVNPPYVPTPEEEIESNGIASSWAGGING 102


>11_05_0096 - 19029632-19029937,19030376-19031197
          Length = 375

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 639 DSFLLIDAIEKDLENLRSRNPALCLEVGSGSGVVVTAFGMAFPSTFCISTDI 794
           +S LLI+A+ +D   +  R     ++VG G G V  A   AFP   C   D+
Sbjct: 189 ESQLLIEAVLRDHAGV-FRGLRSLVDVGGGHGAVAKAIAAAFPDIKCTVMDL 239


>06_03_1340 +
           29455210-29455290,29455493-29455571,29455767-29455814,
           29455908-29455931,29456433-29456615,29456730-29456805,
           29456937-29457072
          Length = 208

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/65 (21%), Positives = 35/65 (53%)
 Frame = -1

Query: 946 SSESVTTYGGLNIMISNILSANELARSILTESNITLLYSAVFFDIMHALKLMSVLIQNVE 767
           ++   + +  L + ++ + +   LA+++ +E+ +T + + VFFDI    K    ++  + 
Sbjct: 2   AARETSRHASLCLWLALVAATLSLAQAVESEAELTKVTTKVFFDITINGKPAGRIVMGLF 61

Query: 766 GNAIP 752
           GN +P
Sbjct: 62  GNTVP 66


>10_01_0094 - 1142271-1142570,1142658-1143458
          Length = 366

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 636 EDSFLLIDAIEKDLENLRSRNPALCLEVGSGSGVVVTAFGMAFPSTFCISTDI 794
           EDS + +D I K+   +     +L ++VG G G    A   AFP+  C   D+
Sbjct: 182 EDSRVAMDIILKESCGIFQGISSL-IDVGGGHGAAAAAIATAFPNIKCTVLDL 233


>09_02_0562 - 10687827-10688126,10688228-10689022
          Length = 364

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 636 EDSFLLIDAIEKDLENLRSRNPALCLEVGSGSGVVVTAFGMAFPSTFCISTDI 794
           EDS + +D I +   N+  R     ++VG G G V  A   AFP   C   D+
Sbjct: 181 EDSSVAMDIILRKSSNV-FRGINSLVDVGGGYGAVAAAVVRAFPDIKCTVLDL 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,109,893
Number of Sequences: 37544
Number of extensions: 387487
Number of successful extensions: 1052
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)