Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_E13.2
         (1341 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   5.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   6.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   8.7  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   8.7  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 302  IYRGLLSSDAPARYGISNQTNPSH*WGTTEGCS 400
            +Y G +++D   R+   + + P+  WG  EG S
Sbjct: 2841 LYSGSMANDGNLRFWEWDWSKPATVWGALEGAS 2873


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 6.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 293  GPTIYRGLLSSDAPARYGISNQTNPSH*WGTTEGCS 400
            G  +Y+G  ++D  AR+   + + P   W T +G S
Sbjct: 2837 GYLLYKGSKANDGNARFWEWDWSKPETVWSTLKGIS 2872


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 471 KGHQRTGISIRRRQPSKPSLRCKQPNGRRR 560
           +GH R  ++ R   P++ +     P GRRR
Sbjct: 465 RGHVRARLTRRTIPPTRVAAAAAAPEGRRR 494


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -1

Query: 639 INRF*DVL---VVGSIQEFWIALQEVSHPIFS-GHSAVYIEGMV*MV 511
           INR  D L   ++ S  E W  L+  S PIFS G    ++  MV M+
Sbjct: 104 INRQHDPLSGHMLNSGSERWSVLRHASSPIFSTGRLRAFLPEMVQMI 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 985,827
Number of Sequences: 2352
Number of extensions: 19467
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 154023705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)