Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_E12.2
         (1300 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1645 + 38884606-38884777,38885509-38885567,38885933-388861...    41   0.002
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281...    31   2.0  
11_06_0696 + 26358713-26359779,26359826-26360110,26360177-263603...    30   4.6  
10_08_0877 + 21230447-21230815,21231855-21232208,21232417-212325...    30   4.6  
09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937...    30   4.6  
07_01_0593 + 4417753-4417759,4418240-4419698,4419819-4421301,442...    30   4.6  

>01_06_1645 +
           38884606-38884777,38885509-38885567,38885933-38886114,
           38886559-38886634
          Length = 162

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 20/73 (27%), Positives = 40/73 (54%)
 Frame = +3

Query: 243 ARIEXCRGCSLNRLPEVKRFVMDDAPNYDRVEVKFISGAPPELILLGEGDHELERLPLSH 422
           A IE C    L   PE+  F+ +D  ++  VE +++ G+PP+LI+L +   + E + + +
Sbjct: 83  AIIEVCMR-KLVFYPEIVGFLEEDKDDFPYVEARYVYGSPPKLIMLDDKGDQKETIRIDN 141

Query: 423 LNQEQCNELIQSK 461
             +E   + ++ K
Sbjct: 142 WKREHIRQFLKEK 154


>05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,
            2816180-2816292,2818409-2818506,2818636-2818815,
            2818893-2819114,2819270-2819404,2819489-2819771,
            2819858-2819931,2820164-2820384,2820463-2820550,
            2820651-2820744,2820827-2821015,2821369-2821400,
            2821542-2821621,2821718-2821807,2821911-2821980,
            2822240-2822285,2822370-2822428,2822588-2822753,
            2822929-2823107,2823186-2823392,2823529-2823633,
            2823701-2823703
          Length = 1152

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 22/61 (36%), Positives = 34/61 (55%)
 Frame = +3

Query: 336  EVKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNKKSDL*TT*CIRY 515
            EVK++  A  +   +GEGD E +  PL+   QE+  +L++ +GFS   + D  T   IR 
Sbjct: 893  EVKYLVQANQKKDTVGEGDDEDQLEPLTVEEQEEKEQLLE-EGFSTWTRRDFNT--FIRA 949

Query: 516  C 518
            C
Sbjct: 950  C 950


>11_06_0696 +
           26358713-26359779,26359826-26360110,26360177-26360356,
           26360516-26360585,26361051-26361950
          Length = 833

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 246 RIEXCRGCS-LNRLPEVKRFVMDDAPNYDRVEVKFISGAPPELILLGEGDHELERLPLSH 422
           ++E C G   ++ LP+V+   +++ PN   VE   + G   E + L EG  E+  L +  
Sbjct: 757 QVEGCEGLERVSNLPQVRELFVNECPNLRHVEE--LGGL--EQLWLDEGMQEISSLWVPR 812

Query: 423 LNQEQCNEL 449
           L QEQ  +L
Sbjct: 813 L-QEQHRQL 820


>10_08_0877 +
           21230447-21230815,21231855-21232208,21232417-21232504,
           21232844-21233268,21233477-21233632,21233849-21234016,
           21234170-21234310,21234393-21234629,21234710-21234823,
           21235096-21235272
          Length = 742

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 339 VKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNKKSD 488
           + FI   P EL ++  GD      P S L +  C+   +   +SN + SD
Sbjct: 230 LNFIGSLPRELEVVNSGDASAIEKPQSELFKHDCSSSGKCSEYSNTESSD 279


>09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,
            9370960-9371022
          Length = 1203

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 414  LSHLNQEQCNELIQSKGFSNNKKSDL*TT*CIRYCTF 524
            L HL    CN + Q+ G + N KS + T  C+RY +F
Sbjct: 1072 LQHLEVSYCNSITQAFGHNMN-KSTVPTFPCLRYLSF 1107


>07_01_0593 + 4417753-4417759,4418240-4419698,4419819-4421301,
            4421378-4421419,4421420-4421584,4421669-4421864,
            4421955-4422066,4422154-4422301,4422417-4422614,
            4422710-4422866,4422882-4422988,4423084-4423245,
            4423314-4423562,4423676-4423810
          Length = 1539

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 222  ELSDIVSARIEXCRGCSLNRLPEVKRFVMDDAPNYDRVEVKFISGAPPELI 374
            EL+ I   RI    GC  + LP+ KR    +  +Y+RV+VK  SG   +LI
Sbjct: 1388 ELNLIRCQRIPKRPGCDWHDLPDEKR----NVNHYERVQVKLSSGQLVDLI 1434


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,087,525
Number of Sequences: 37544
Number of extensions: 347153
Number of successful extensions: 735
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4050598896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)