BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_E08.2
(1370 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 27 0.96
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.96
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 27.5 bits (58), Expect = 0.96
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 1066 PXPXXGXXXXXXXXPPPPPPPXP 998
P P PPPPPPP P
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPP 791
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.5 bits (58), Expect = 0.96
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 782 GXGGGVXPXGGGX-GXPXXXXXXGGXGXXPXXXGXXKXXXXGXXGGG 919
G GGG GGG G P GG G + G GGG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 848,955
Number of Sequences: 2352
Number of extensions: 14491
Number of successful extensions: 308
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 158087655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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