Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_E05.2
(1286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0484 + 8805053-8805538 43 6e-04
03_02_0485 - 8808139-8808618 42 8e-04
03_02_0483 - 8804021-8804485 42 0.001
03_02_0478 + 8775892-8776377 37 0.040
01_01_0229 - 1943473-1943922 36 0.052
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.091
01_01_0231 + 1951047-1951499 34 0.21
02_05_0159 - 26368562-26369239,26371374-26371853 32 0.85
01_01_0228 + 1940149-1940649 30 3.4
03_02_0771 + 11041882-11042073,11042669-11042851,11042946-110430... 29 7.9
01_01_0227 + 1933247-1933699 29 7.9
>03_02_0484 + 8805053-8805538
Length = 161
Score = 42.7 bits (96), Expect = 6e-04
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Frame = +3
Query: 219 PFSVFSRDPFFRDPIKYIRQATSPIEDSHGIEGVYSDSEI----KVDGKKV-EVHL---D 374
PFS+ DPF P +++ I S G S++ ++D K+ E H+ D
Sbjct: 12 PFSLDLWDPFDGFPFGSGSRSSGSIFPSFP-RGTSSETAAFAGARIDWKETPEAHVFKAD 70
Query: 375 VQNFTPEQIQVKTV-GNEIMIEGKKEIKRE---DGWTR-----SHFERRFLLPEGFPPER 527
V E+++V+ GN + I G++ ++E D W R F RRF LPE PE+
Sbjct: 71 VPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQ 130
Query: 528 VECHLDKGKLKLIAFRAEPLQERAVPIQ 611
++ ++ G L + + EP + IQ
Sbjct: 131 IKASMENGVLTVTVPKEEPKKPDVKSIQ 158
>03_02_0485 - 8808139-8808618
Length = 159
Score = 42.3 bits (95), Expect = 8e-04
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Frame = +3
Query: 339 KVDGKKV-EVHL---DVQNFTPEQIQVKTV-GNEIMIEGKKEIKRE---DGWTR-----S 479
++D K+ EVH+ DV E+++V+ GN + I G++ ++E D W R
Sbjct: 53 RIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSG 112
Query: 480 HFERRFLLPEGFPPERVECHLDKGKLKLIAFRAEPLQERAVPIQ 611
F RRF LPE PE+++ ++ G L + + EP + IQ
Sbjct: 113 KFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQ 156
>03_02_0483 - 8804021-8804485
Length = 154
Score = 41.9 bits (94), Expect = 0.001
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Frame = +3
Query: 219 PFSVFSRDPFFRDPIKYIRQATSPIEDSHGIEGVYSDSEIKVDGKKV-EVHL---DVQNF 386
PFS+ DPF D + + S ++ ++ + ++D K+ E H+ DV
Sbjct: 12 PFSLDLWDPF--DGFPFGSGSGSLFPRANSDAAAFAGA--RIDWKETPEAHVFKADVPGL 67
Query: 387 TPEQIQVKTV-GNEIMIEG---KKEIKREDGWTR-----SHFERRFLLPEGFPPERVECH 539
E+++V+ GN + I G K++ ++ D W R F RRF LPE PE+++
Sbjct: 68 KKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKAS 127
Query: 540 LDKGKLKLIAFRAEPLQERAVPIQ 611
++ G L + + EP + IQ
Sbjct: 128 MENGVLTVTVPKEEPKKPDVKSIQ 151
>03_02_0478 + 8775892-8776377
Length = 161
Score = 36.7 bits (81), Expect = 0.040
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Frame = +3
Query: 219 PFSVFSRDPFFRDPIKYIRQATSPIEDSHGIEGVYSDSEI----KVDGKKV-EVHL---D 374
PFS+ DPF P ++ I S G S++ ++D K+ E H+ D
Sbjct: 12 PFSLDLWDPFDGFPFGSGGSSSGSIFPSFP-RGASSETAAFAGARIDWKETPEAHVFKAD 70
Query: 375 VQNFTPEQIQVKTV-GNEIMIEGKKEIKRE---DGWTR-----SHFERRFLLPEGFPPER 527
V E+++V+ GN + I G++ ++E D W R F RRF LP+ PE+
Sbjct: 71 VPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQ 130
Query: 528 VECHLDKGKLKLIAFRAEPLQERAVPIQ 611
++ ++ G L + + E + IQ
Sbjct: 131 IKASMENGVLTVTVPKEEAKKPDVKSIQ 158
>01_01_0229 - 1943473-1943922
Length = 149
Score = 36.3 bits (80), Expect = 0.052
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Frame = +3
Query: 240 DPF--FRDPIKYIRQATSPIEDSHGIEGVYSDSEIKVDGKKV-EVHL---DVQNFTPEQI 401
DPF F DP + ++ P + +VD K+ E H+ D+ E++
Sbjct: 11 DPFADFWDPFDGVFRSLVPATSDRDTAAF---ANARVDWKETPESHVFKADLPGVKKEEV 67
Query: 402 QVKTV-GNEIMIEGKKEIKREDG---WTR-----SHFERRFLLPEGFPPERVECHLDKGK 554
+V+ GN ++I G++ ++ED W R F RRF LPE ++V+ ++ G
Sbjct: 68 KVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGV 127
Query: 555 LKLIAFRAE 581
L + +AE
Sbjct: 128 LTVTVPKAE 136
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.091
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Frame = +3
Query: 339 KVDGKKV-EVHL---DVQNFTPEQIQVKTV-GNEIMIEGKKEIKREDG---WTR-----S 479
++D K+ E H+ D+ E+++V+ GN ++I G++ ++ED W R
Sbjct: 44 RIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSG 103
Query: 480 HFERRFLLPEGFPPERVECHLDKGKLKLIAFRAEPLQERAVPIQ-EKSVNSEQTK*KMSF 656
F RRF LPE ++V+ L+ G L + +AE + I+ N + K K+++
Sbjct: 104 QFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISGGENISRGKYKVNW 163
Query: 657 K 659
K
Sbjct: 164 K 164
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.3 bits (75), Expect = 0.21
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Frame = +3
Query: 339 KVDGKKV-EVHL---DVQNFTPEQIQVKTV-GNEIMIEGKKEIKREDG---WTR-----S 479
++D K+ E H+ D+ E+++V+ GN ++I G++ ++ED W R
Sbjct: 44 RIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSG 103
Query: 480 HFERRFLLPEGFPPERVECHLDKGKLKLIAFRAE 581
F RRF LPE ++V+ ++ G L + +AE
Sbjct: 104 QFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAE 137
>02_05_0159 - 26368562-26369239,26371374-26371853
Length = 385
Score = 32.3 bits (70), Expect = 0.85
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 632 LTVYRFLLNWHRPLLQRFSSKGDKLQLPFIQVTLYSFRRETFRQKEPSLEV 480
LT+ RFLL+W R R ++G LP Q Y R ET R++ S+ +
Sbjct: 184 LTLARFLLSWAR-THARIRAQGKATPLPMAQYLAYFQRPETTRKRVRSVPI 233
>01_01_0228 + 1940149-1940649
Length = 166
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Frame = +3
Query: 393 EQIQVKT-VGNEIMIEGKKEIKREDGWTRSH--------FERRFLLPEGFPPERVECHLD 545
E+++V+ GN ++I G++ ++RE+ RSH F RF LP+ + V +D
Sbjct: 65 EEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMD 124
Query: 546 KGKL 557
G L
Sbjct: 125 GGML 128
>03_02_0771 +
11041882-11042073,11042669-11042851,11042946-11043020,
11043089-11043283,11043380-11043478,11044189-11044352,
11045676-11045742,11045842-11045894,11046287-11046413,
11047439-11047627,11048201-11048287,11048411-11048565,
11048814-11048933,11049043-11049268,11049729-11049788,
11049877-11050050,11050138-11050247,11050417-11050582
Length = 813
Score = 29.1 bits (62), Expect = 7.9
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 375 VQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFP---PERVECHLD 545
VQ+F E + KT E ++GK+ + W +++ +PE FP ER+E +LD
Sbjct: 666 VQSFASEHL--KTPLGE-PVKGKQNKSNTELWVEKFYKKVTTMPEPFPHELVERLEEYLD 722
Query: 546 KGKLKLIAFRAEPLQERAVPIQEKS 620
+ + +L+ + R V + S
Sbjct: 723 RLEGQLVDLSSLLYDHRLVDAYQNS 747
>01_01_0227 + 1933247-1933699
Length = 150
Score = 29.1 bits (62), Expect = 7.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 483 FERRFLLPEGFPPERVECHLDKGKLKLIAFRAEPL--QERAVPI 608
F+RRF LP G ++V +D G L + + E Q +A+PI
Sbjct: 105 FQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPI 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,518,252
Number of Sequences: 37544
Number of extensions: 335811
Number of successful extensions: 779
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4004040288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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