Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_E01.2
         (1301 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69150-1|CAB56794.1|  152|Homo sapiens ribosomal protein S18 pro...    72   4e-12
BC106063-1|AAI06064.1|  152|Homo sapiens ribosomal protein S18 p...    72   4e-12
BC101788-1|AAI01789.1|  152|Homo sapiens ribosomal protein S18 p...    72   4e-12
BC101786-1|AAI01787.1|  152|Homo sapiens ribosomal protein S18 p...    72   4e-12
AL844527-17|CAI41848.1|  152|Homo sapiens ribosomal protein S18 ...    72   4e-12
AL713971-5|CAI17656.1|  152|Homo sapiens ribosomal protein S18 p...    72   4e-12
AL662827-19|CAI17530.1|  152|Homo sapiens ribosomal protein S18 ...    72   4e-12
AL662820-19|CAI18127.1|  152|Homo sapiens ribosomal protein S18 ...    72   4e-12
AL645940-16|CAI18076.1|  152|Homo sapiens ribosomal protein S18 ...    72   4e-12
AL031228-3|CAA20231.1|  152|Homo sapiens ribosomal protein S18 p...    72   4e-12
AL031228-2|CAI95617.1|   82|Homo sapiens ribosomal protein S18 p...    46   4e-04
BC071678-1|AAH71678.1|   74|Homo sapiens LOC645958 protein protein.    42   0.004

>X69150-1|CAB56794.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>BC106063-1|AAI06064.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>BC101788-1|AAI01789.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>BC101786-1|AAI01787.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>AL844527-17|CAI41848.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>AL713971-5|CAI17656.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>AL662827-19|CAI17530.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>AL662820-19|CAI18127.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>AL645940-16|CAI18076.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>AL031228-3|CAA20231.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score = 72.1 bits (169), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
           +G+ K+ F +   KG   RY+  VL+KA ID   R GE   + VE+  TIM N RQYKIP
Sbjct: 21  DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIP 80

Query: 343 YWFXNRXNDI 372
            WF NR  D+
Sbjct: 81  DWFLNRQKDV 90



 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 103 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148


>AL031228-2|CAI95617.1|   82|Homo sapiens ribosomal protein S18
           protein.
          Length = 82

 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K RE+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 33  LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 78



 Score = 34.3 bits (75), Expect = 0.99
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +1

Query: 313 MSNXRQYKIPYWFXNRXNDI 372
           M N RQYKIP WF NR  D+
Sbjct: 1   MQNPRQYKIPDWFLNRQKDV 20


>BC071678-1|AAH71678.1|   74|Homo sapiens LOC645958 protein protein.
          Length = 74

 Score = 42.3 bits (95), Expect = 0.004
 Identities = 22/46 (47%), Positives = 25/46 (54%)
 Frame = +2

Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
           LD+K  E+LERLK IRA RG   +W   V G      G R R V V
Sbjct: 25  LDNKLCEDLERLKKIRARRGLRHFWGLRVRGQHTKTTGCRGRTVGV 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,191,604
Number of Sequences: 237096
Number of extensions: 429407
Number of successful extensions: 237
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18770764430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)