Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_E01.2
(1301 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal prot... 79 1e-14
BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p pro... 79 1e-14
AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p pro... 79 1e-14
AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB... 79 1e-14
AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA... 79 1e-14
BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p pro... 56 8e-08
>L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal protein
S18 protein.
Length = 152
Score = 79.4 bits (187), Expect = 1e-14
Identities = 37/71 (52%), Positives = 43/71 (60%)
Frame = +1
Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
+GK KV M KG RYS VLKKA +D R GEC E V+K TI+SN QYK+P
Sbjct: 21 DGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 80
Query: 343 YWFXNRXNDIV 375
WF NR DI+
Sbjct: 81 NWFLNRQKDII 91
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +2
Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
LDSK R++LERLK IR+ RG YW V G G R R V V
Sbjct: 103 LDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGV 148
>BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p
protein.
Length = 152
Score = 79.4 bits (187), Expect = 1e-14
Identities = 37/71 (52%), Positives = 43/71 (60%)
Frame = +1
Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
+GK KV M KG RYS VLKKA +D R GEC E V+K TI+SN QYK+P
Sbjct: 21 DGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 80
Query: 343 YWFXNRXNDIV 375
WF NR DI+
Sbjct: 81 NWFLNRQKDII 91
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +2
Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
LDSK R++LERLK IR+ RG YW V G G R R V V
Sbjct: 103 LDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGV 148
>AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p
protein.
Length = 152
Score = 79.4 bits (187), Expect = 1e-14
Identities = 37/71 (52%), Positives = 43/71 (60%)
Frame = +1
Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
+GK KV M KG RYS VLKKA +D R GEC E V+K TI+SN QYK+P
Sbjct: 21 DGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 80
Query: 343 YWFXNRXNDIV 375
WF NR DI+
Sbjct: 81 NWFLNRQKDII 91
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +2
Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
LDSK R++LERLK IR+ RG YW V G G R R V V
Sbjct: 103 LDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGV 148
>AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB,
isoform B protein.
Length = 152
Score = 79.4 bits (187), Expect = 1e-14
Identities = 37/71 (52%), Positives = 43/71 (60%)
Frame = +1
Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
+GK KV M KG RYS VLKKA +D R GEC E V+K TI+SN QYK+P
Sbjct: 21 DGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 80
Query: 343 YWFXNRXNDIV 375
WF NR DI+
Sbjct: 81 NWFLNRQKDII 91
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +2
Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
LDSK R++LERLK IR+ RG YW V G G R R V V
Sbjct: 103 LDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGV 148
>AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA,
isoform A protein.
Length = 152
Score = 79.4 bits (187), Expect = 1e-14
Identities = 37/71 (52%), Positives = 43/71 (60%)
Frame = +1
Query: 163 NGKSKVXFXMRXXKGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
+GK KV M KG RYS VLKKA +D R GEC E V+K TI+SN QYK+P
Sbjct: 21 DGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 80
Query: 343 YWFXNRXNDIV 375
WF NR DI+
Sbjct: 81 NWFLNRQKDII 91
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +2
Query: 410 LDSKFRENLERLKXIRAXRGXXDYWXXXVSGXXIXXIGXRXRXVXV 547
LDSK R++LERLK IR+ RG YW V G G R R V V
Sbjct: 103 LDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGV 148
>BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p
protein.
Length = 246
Score = 56.4 bits (130), Expect = 8e-08
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +1
Query: 202 KGXXXRYSKXVLKKAXIDXXXRTGECIXEXVEKXXTIMSNXRQYKIP 342
KG RYS VLKKA +D R GEC E V+K TI+SN QYK+P
Sbjct: 2 KGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,175,797
Number of Sequences: 53049
Number of extensions: 120157
Number of successful extensions: 82
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7049094330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -