Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D22.2
         (1271 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0512 + 14913356-14913769,14915907-14916032,14916129-149161...    40   0.006
06_01_0109 - 863806-864045,864448-864566,864680-864851,864914-86...    38   0.022
06_01_0314 + 2255908-2255979,2256354-2256512,2257021-2257209,225...    35   0.16 

>05_03_0512 +
           14913356-14913769,14915907-14916032,14916129-14916185,
           14916950-14917027,14917681-14917773
          Length = 255

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +2

Query: 275 LDQRKHXATYIXNLKVXEEKXAQEXXKGDIDXIIKLAXALKXNGGG 412
           L  +KH ATY+ N     E+      KGD   I+ L  A+K NGGG
Sbjct: 54  LHHQKHHATYVANYNKALEQLDAAVAKGDAPAIVHLQSAIKFNGGG 99


>06_01_0109 -
           863806-864045,864448-864566,864680-864851,864914-865108,
           865179-865388,865738-865926
          Length = 374

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 431 FWHXLSXNGG-KPSDVLTKXVXKXFGSWDNLXNXXXXXXVXVXGSGWGW 574
           +W  +   GG KP + L K + + FGS+D +            GSGW W
Sbjct: 205 YWRSMQPGGGGKPPERLLKFINRDFGSYDGMIRQFMDAASTQFGSGWVW 253


>06_01_0314 +
           2255908-2255979,2256354-2256512,2257021-2257209,
           2257390-2257561,2257711-2257784,2257818-2257904,
           2257975-2257998,2258100-2258225
          Length = 300

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 431 FWHXLSXNGG-KPSDVLTKXVXKXFGSWDNLXNXXXXXXVXVXGSGWGW 574
           FW  +   GG  P   + + + K FGS+ N         + + GSGW W
Sbjct: 147 FWESMQPEGGGSPGRGVLQQIEKDFGSFTNFREEFIRSALSLLGSGWVW 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,745,289
Number of Sequences: 37544
Number of extensions: 162810
Number of successful extensions: 151
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3945842028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)