Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D19.2
         (1320 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1811 - 40055106-40055174,40055291-40055440,40056696-40056782     37   0.041
01_06_1812 - 40057904-40057972,40058071-40058220,40059449-40059532     35   0.16 

>01_06_1811 - 40055106-40055174,40055291-40055440,40056696-40056782
          Length = 101

 Score = 36.7 bits (81), Expect = 0.041
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 321 CARAGLSMQVVRFXFAGQPINAXATPTSLELEAGATIAVYQQQPGG 458
           C R  + ++ + F F G+ +NA  TP  LE+E G  I     Q GG
Sbjct: 52  CDRQSVDIKSIAFLFDGRRLNAEQTPDQLEMEDGDEIDAMLHQTGG 97


>01_06_1812 - 40057904-40057972,40058071-40058220,40059449-40059532
          Length = 100

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 321 CARAGLSMQVVRFXFAGQPINAXATPTSLELEAGATIAVYQQQPGG 458
           C R  + M  + F F G+ +    TP  LE+E G  I     Q GG
Sbjct: 51  CDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,585,737
Number of Sequences: 37544
Number of extensions: 283479
Number of successful extensions: 468
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)