Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D19.2
         (1320 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p pro...    75   3e-13
AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.      75   3e-13
AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-li...    75   3e-13
AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA...    75   3e-13

>AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p
           protein.
          Length = 90

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 39/56 (69%), Positives = 40/56 (71%)
 Frame = +3

Query: 291 PLRSLAAWLLCARAGLSMQVVRFXFAGQPINAXATPTSLELEAGATIAVYQQQPGG 458
           PLR L     C RAGLSMQVVRF F GQPIN   TPTSLE+E G TI VYQQQ GG
Sbjct: 34  PLRKLMN-AYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.
          Length = 90

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 39/56 (69%), Positives = 40/56 (71%)
 Frame = +3

Query: 291 PLRSLAAWLLCARAGLSMQVVRFXFAGQPINAXATPTSLELEAGATIAVYQQQPGG 458
           PLR L     C RAGLSMQVVRF F GQPIN   TPTSLE+E G TI VYQQQ GG
Sbjct: 34  PLRKLMN-AYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-like
           protein SMT3 protein.
          Length = 90

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 39/56 (69%), Positives = 40/56 (71%)
 Frame = +3

Query: 291 PLRSLAAWLLCARAGLSMQVVRFXFAGQPINAXATPTSLELEAGATIAVYQQQPGG 458
           PLR L     C RAGLSMQVVRF F GQPIN   TPTSLE+E G TI VYQQQ GG
Sbjct: 34  PLRKLMN-AYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA
           protein.
          Length = 90

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 39/56 (69%), Positives = 40/56 (71%)
 Frame = +3

Query: 291 PLRSLAAWLLCARAGLSMQVVRFXFAGQPINAXATPTSLELEAGATIAVYQQQPGG 458
           PLR L     C RAGLSMQVVRF F GQPIN   TPTSLE+E G TI VYQQQ GG
Sbjct: 34  PLRKLMN-AYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,460,770
Number of Sequences: 53049
Number of extensions: 491411
Number of successful extensions: 869
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7171332960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)