Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_D18.2
(1282 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.069
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 34 0.28
05_01_0142 - 940421-940701,941262-941574 33 0.64
03_01_0515 - 3864796-3865425 33 0.64
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 32 0.85
09_03_0145 - 12749288-12751510 32 1.1
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 32 1.1
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 31 2.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 2.0
07_01_0080 + 587674-588510 31 2.6
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 2.6
01_03_0005 + 11568545-11569119,11569179-11569191 31 2.6
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 30 3.4
11_06_0610 - 25449085-25453284 30 4.5
08_01_0059 - 394001-394708 30 4.5
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 4.5
07_03_0004 - 12260322-12261432,12261691-12261821,12262386-122624... 30 4.5
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 4.5
08_01_0134 + 1067826-1068158 29 6.0
05_01_0141 - 937428-937717,938483-938705 29 6.0
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 6.0
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 29 7.9
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 29 7.9
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 29 7.9
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 7.9
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.9 bits (79), Expect = 0.069
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 926 PPPLXGGXPPPX--GXTPPXXFKXPPPXPGGKXG 831
PPP G PPP G +PP PPP PGGK G
Sbjct: 347 PPPAKGPPPPPPPKGPSPP-----PPPPPGGKKG 375
Score = 33.1 bits (72), Expect = 0.48
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGGK 837
PP PPP G PP K PPP P K
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPK 360
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGGK 837
PPP PPP PP K PPP P K
Sbjct: 326 PPP----PPPPKAAPPPPPPKGPPPPPPAK 351
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -3
Query: 926 PP--PLXGGXPPPXGXTPPXXFKXPPPXPG 843
PP P G PPP G PP PPP PG
Sbjct: 32 PPQQPAYGHMPPPQGAPPPFLAPPPPPPPG 61
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 32.7 bits (71), Expect = 0.64
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -3
Query: 938 GFFXPPPLXGGXPPPXGXTPPXXFKXPP----PXPGG 840
G + PPP G PPP G PP PP P PGG
Sbjct: 45 GAYPPPP--GAYPPPPGAYPPPPGAYPPQHGYPQPGG 79
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 923 PPLXGGXPPPXGXTPPXXFKXPPPXPG 843
PP G PPP G PP PPP PG
Sbjct: 41 PPPPGAYPPPPGAYPPPPGAYPPP-PG 66
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.7 bits (71), Expect = 0.64
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPPL PPP PP PPP P
Sbjct: 85 PPPLPPPPPPPAASPPPPPPSPPPPSP 111
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP PPP PP K PP P
Sbjct: 93 PPPAASPPPPPPSPPPPSPVKSSPPPP 119
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.3 bits (70), Expect = 0.85
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = -3
Query: 923 PPLXGGXPPPXGXTPPXXFKXPPPXPGGKXGXFF---FFXXXFXKXGPXG 783
PP+ PP +PP PPP P G G + F + GP G
Sbjct: 717 PPVYAPYPPGITPSPPEYAPEPPPGPPGGGGGYLPPVVFPPPYASRGPPG 766
>09_03_0145 - 12749288-12751510
Length = 740
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGGK 837
PPP G PPP + PPP PGG+
Sbjct: 33 PPPPPGIQPPPPALPGMPHGRPPPPFPGGR 62
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPPL PPP PP PPP P
Sbjct: 427 PPPLPPPPPPPPPPPPPLPPNMPPPLP 453
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 277 PXXXXGGGXGGXXXPPXKGXXPPXXPPPXXXGXGXXGGG 161
P G GG PP PP PPP G G G
Sbjct: 44 PGGGGGDRRGGFQLPPDAAPPPPPPPPPSSAAAGGGGPG 82
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 162 PPPXXPXPXXXGGGXXGGXXPXXGGXXXPPXPPP 263
PPP P P G G G P P PPP
Sbjct: 302 PPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPP 335
>07_01_0080 + 587674-588510
Length = 278
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPP 852
PPP G PPP PP PPP
Sbjct: 97 PPPSSGSPPPPPPPPPPPPPPPPPP 121
Score = 30.3 bits (65), Expect = 3.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPP 852
PPP G PPP PP PPP
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 938 GFFXPPPLXGGXPPPXGXTPPXXFKXPPPXP 846
G F PP PP G PP PPP P
Sbjct: 86 GMFRRPPPPPPPPPSSGSPPPPPPPPPPPPP 116
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 989 GGXXKXXXXXXPXXFXXGFFXPPPLXGGXPPPXGXTPPXXFKXPPPXPGGKXG 831
GG P G PPP G PP P PPP P G G
Sbjct: 1079 GGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLG 1131
Score = 29.1 bits (62), Expect = 7.9
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = -3
Query: 926 PPP---LXGGXPPPXGXTPPXXFKXPPPXPGGKXGXFFFFXXXFXKXGPXGVFLGGXPXF 756
PPP L G PP P PPP P G G P F GG P
Sbjct: 1124 PPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLG-------GPPAPPPPAGFRGGTPPP 1176
Query: 755 FXXXGVXPPP 726
GV PPP
Sbjct: 1177 NAHGGVAPPP 1186
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 938 GFFXPPPLXGGXPPPXGXTPPXXFKXPPPXPGGKXG 831
G PPP GG P PP F+ P P G
Sbjct: 1146 GGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGG 1181
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 177 PXPXXXGGGXXGGXXPXXGGXXXPPXPPP 263
P P GGG GG GG P PPP
Sbjct: 114 PPPTGGGGGGGGGWQQGGGGGGAYPTPPP 142
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -3
Query: 926 PPPLXG--GXPPPXGXTPPXXFKXPPPXPGG 840
PPP G G P P PP ++ PP P G
Sbjct: 166 PPPTSGAPGAPIPNSGAPPAMYQTNPPQPAG 196
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPP 852
PPP+ PP +PP K PPP
Sbjct: 1162 PPPIKSPPPPAPVISPPPPVKSPPP 1186
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPP 852
PPP+ PP +PP K PPP
Sbjct: 1194 PPPVKSPPPPAPVISPPPPVKSPPP 1218
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 932 FXPPPLXGGXPPPXGXTP--PXXFKXPPPXPGG 840
+ PP PPP G +P P PPP P G
Sbjct: 539 YSPPATPESSPPPEGKSPPTPTASHSPPPVPEG 571
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP PPP PP PPP P
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSP 30
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPPL G PPP PP + PPP P
Sbjct: 1185 PPPLPSG-PPPQPAPPPLPIQ-PPPIP 1209
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPPL G PP +PP PP P
Sbjct: 1139 PPPLPEGPPPLPSDSPPCQPPLPPSPP 1165
>07_03_0004 -
12260322-12261432,12261691-12261821,12262386-12262491,
12262777-12262875,12262960-12263312,12263593-12263619
Length = 608
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 920 PLXGGXPPPXGXTPPXXFKXPPPXPGGKXG 831
P+ PPP PP K PPP P + G
Sbjct: 83 PIDPNLPPPIIRKPPPKVKQPPPPPKKRVG 112
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 250 GGXXXPPXKGXXPPXXPPPXXXGXGXXGGG 161
GG P G P PPP G G GGG
Sbjct: 380 GGYGGRPMPGGGGPGAPPPYHGGGGGGGGG 409
>08_01_0134 + 1067826-1068158
Length = 110
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPPL PPP P PPP P
Sbjct: 2 PPPLPSSRPPPPPPLPRPHPAPPPPCP 28
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = -1
Query: 262 GGGXGGXXXPPXKGXXPP---XXPPPXXXGXGXXGG 164
GGG G PP +G PP PPP G G G
Sbjct: 24 GGGGHGYPYPPQQGYYPPPPTAYPPPPPAGYGGGYG 59
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPG 843
PPP G P PP PPP PG
Sbjct: 424 PPPPPGSYAPVPWGQPPPYASYPPPPPG 451
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 162 PPPXXPXPXXXGGGXXGGXXPXXGG 236
PPP P P GGG GG P GG
Sbjct: 265 PPPLLPPPCYSGGG-GGGYTPYCGG 288
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 932 FXPPPLXGGXPPPXGXTPPXXFKXPPPXP 846
F PPP PPP T P PPP P
Sbjct: 45 FAPPPPQPTLPPPPPRTLPPPPPPPPPQP 73
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 162 PPPXXPXPXXXGGGXXGGXXPXXGGXXXPPXPPP 263
PPP P P GGG G PP PPP
Sbjct: 11 PPPPPPPPFGRGGGG-AGYPRGHKQLYAPPPPPP 43
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP PPP PP PPP P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPP 379
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,768,777
Number of Sequences: 37544
Number of extensions: 535897
Number of successful extensions: 4095
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3071
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -