Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_D18.2
(1282 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.009
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.009
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.009
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 37 0.027
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.11
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.14
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.58
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 33 0.58
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 33 0.58
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 3.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 3.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 3.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 3.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 4.1
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 5.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 5.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.1
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 29 9.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 9.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 9.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 923 PPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PP+ GG PPP G P PPP PGG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG 734
Score = 37.9 bits (84), Expect = 0.015
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP GG PPP PP FK PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PP G PP PPP PGG
Sbjct: 744 PPPPPGGLPPISGGPPP-----PPPPPGG 767
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -3
Query: 923 PPLXGGXPPPX--GXTPPXXFKXPPPXPGG 840
PP+ GG PPP G PP PPP P G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 32.3 bits (70), Expect = 0.76
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -3
Query: 923 PPLXGGXPPPX--GXTPPXXFKXPPPXP 846
PP+ GG PPP G PP PPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 32.3 bits (70), Expect = 0.76
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -3
Query: 923 PPLXGGXPPPX----GXTPPXXFKXPPPXPGGKXG 831
PP+ GG PPP G PP PPP PGG G
Sbjct: 752 PPISGGPPPPPPPPGGCPPP----PPPPPPGGFKG 782
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PP G P PPP PGG
Sbjct: 728 PPPPPGGLPPITGGPP------PPPPPGG 750
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 927 PPPPXW-GXPPPXXXNPPGXF*KXPP 853
PPPP G PPP PPG F PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 162 PPPXXPXPXXXGGGXXGGXXPXXGGXXXPPXPPP 263
PPP P G P GG PP PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 923 PPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PP+ GG PPP G P PPP PGG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG 734
Score = 37.9 bits (84), Expect = 0.015
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP GG PPP PP FK PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PP G PP PPP PGG
Sbjct: 744 PPPPPGGLPPISGGPPP-----PPPPPGG 767
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -3
Query: 923 PPLXGGXPPPX--GXTPPXXFKXPPPXPGG 840
PP+ GG PPP G PP PPP P G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 32.3 bits (70), Expect = 0.76
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -3
Query: 923 PPLXGGXPPPX--GXTPPXXFKXPPPXP 846
PP+ GG PPP G PP PPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 32.3 bits (70), Expect = 0.76
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -3
Query: 923 PPLXGGXPPPX----GXTPPXXFKXPPPXPGGKXG 831
PP+ GG PPP G PP PPP PGG G
Sbjct: 752 PPISGGPPPPPPPPGGCPPP----PPPPPPGGFKG 782
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PP G P PPP PGG
Sbjct: 728 PPPPPGGLPPITGGPP------PPPPPGG 750
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 927 PPPPXW-GXPPPXXXNPPGXF*KXPP 853
PPPP G PPP PPG F PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 162 PPPXXPXPXXXGGGXXGGXXPXXGGXXXPPXPPP 263
PPP P G P GG PP PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 923 PPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PP+ GG PPP G P PPP PGG
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGG 317
Score = 37.9 bits (84), Expect = 0.015
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP GG PPP PP FK PP P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PP G PP PPP PGG
Sbjct: 327 PPPPPGGLPPISGGPPP-----PPPPPGG 350
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -3
Query: 923 PPLXGGXPPPX--GXTPPXXFKXPPPXPGG 840
PP+ GG PPP G PP PPP P G
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
Score = 32.3 bits (70), Expect = 0.76
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -3
Query: 923 PPLXGGXPPPX--GXTPPXXFKXPPPXP 846
PP+ GG PPP G PP PPP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 32.3 bits (70), Expect = 0.76
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -3
Query: 923 PPLXGGXPPPX----GXTPPXXFKXPPPXPGGKXG 831
PP+ GG PPP G PP PPP PGG G
Sbjct: 335 PPISGGPPPPPPPPGGCPPP----PPPPPPGGFKG 365
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PP G P PPP PGG
Sbjct: 311 PPPPPGGLPPITGGPP------PPPPPGG 333
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 927 PPPPXW-GXPPPXXXNPPGXF*KXPP 853
PPPP G PPP PPG F PP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 162 PPPXXPXPXXXGGGXXGGXXPXXGGXXXPPXPPP 263
PPP P G P GG PP PPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 37.1 bits (82), Expect = 0.027
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = -3
Query: 956 PXXFXXGFFXPPPLXGGXPPPXGXTPPXXFKXPPPXPGGKXG 831
P F G PPP+ GG PPP PP PPP P G
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPP----PPMFGAPPPPPPPSGLG 124
Score = 33.1 bits (72), Expect = 0.44
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = -3
Query: 956 PXXFXXGFFXPPPLXGGXPPP----XGXTPPXXFKXPPPXPGG 840
P GF PPP GG PPP G PP PPP GG
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPP-----PPPMMGG 103
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 935 FFXPPPLXGGXPPPXGXTPPXXFKXPPPXP 846
FF PPP+ G PP PP PPP P
Sbjct: 63 FFIPPPVPNGFIPP----PPGPGGIPPPPP 88
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 926 PPPLXGGXPPP-XGXTPPXXFKXPPPXPGG 840
PPP G PPP G PP PPP P G
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP PPP G +PP PP P
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -3
Query: 926 PPPLXGGXPPPX--GXTPPXXFKXPPPXP 846
PPP G PPP G PP PPP P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 926 PPPLXGG-XPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PPP +PP PPP P G
Sbjct: 281 PPPPAGGSPPPPRAGSPP-----PPPPPRG 305
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -3
Query: 926 PPPLXGG-XPPPXGXTPPXXFKXPPPXP 846
PPP G PPP G PP PP P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPP 852
PPP GG PPP G P PPP
Sbjct: 313 PPPQAGGSPPPAGTGSP----PPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 926 PPPLXGGXPPP-XGXTPPXXFKXPPPXPGG 840
PPP G PPP G PP PPP P G
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP PPP G +PP PP P
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -3
Query: 926 PPPLXGGXPPPX--GXTPPXXFKXPPPXP 846
PPP G PPP G PP PPP P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 926 PPPLXGG-XPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PPP +PP PPP P G
Sbjct: 302 PPPPAGGSPPPPRAGSPP-----PPPPPRG 326
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -3
Query: 926 PPPLXGG-XPPPXGXTPPXXFKXPPPXP 846
PPP G PPP G PP PP P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPP 852
PPP GG PPP G P PPP
Sbjct: 334 PPPQAGGSPPPAGTGSP----PPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 926 PPPLXGGXPPP-XGXTPPXXFKXPPPXPGG 840
PPP G PPP G PP PPP P G
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXP 846
PPP PPP G +PP PP P
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -3
Query: 926 PPPLXGGXPPPX--GXTPPXXFKXPPPXP 846
PPP G PPP G PP PPP P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 926 PPPLXGG-XPPPXGXTPPXXFKXPPPXPGG 840
PPP GG PPP +PP PPP P G
Sbjct: 287 PPPPAGGSPPPPRAGSPP-----PPPPPRG 311
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -3
Query: 926 PPPLXGG-XPPPXGXTPPXXFKXPPPXP 846
PPP G PPP G PP PP P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPP 852
PPP GG PPP G P PPP
Sbjct: 319 PPPQAGGSPPPAGTGSP----PPPP 339
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGG 840
PPPL GG PP G PP PPP GG
Sbjct: 1585 PPPLMGGPPPRLGMPPP----GPPPPNGG 1609
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTP----PXXFKXPPPXPG 843
PPP+ GG PP G P P F+ PP PG
Sbjct: 1482 PPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPG 1513
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.58
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 162 PPPXXPXPXXXGGGXXGGXXPXXGGXXXPPXPPP 263
PPP P P G G GG PP PPP
Sbjct: 551 PPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPP 584
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPG 843
PP L GG PPP PP PPP PG
Sbjct: 782 PPRLQGGIPPP----PPLGIIPPPPPPG 805
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPG 843
PP L GG PPP PP PPP PG
Sbjct: 782 PPRLQGGIPPP----PPLGIIPPPPPPG 805
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 260 GGXGGXXXPPPXGXXPPXXXPPPXXXXGXXG 168
GG GG PPP G P PP G G
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG 434
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -2
Query: 936 FFXPPPPXWGXPPPXXXNPPGXF*KXPPFXRGKXGXIFFFXPGFXKXXAXGGFFGGXP 763
F P P +G PPP + PG F PP G G F GG G P
Sbjct: 356 FHAPSPQSFGGPPPPVSSAPGNF--APPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGP 411
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -3
Query: 926 PPPLXG---GXPPPXGXTPPXXFKXPPPXP 846
PPPL PPP PP K PPP P
Sbjct: 73 PPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 3.1
Identities = 29/89 (32%), Positives = 29/89 (32%), Gaps = 9/89 (10%)
Frame = -3
Query: 1079 PPXXFFXPPXXPFFFXFXXXXXPGXNFFFXGGXXKXXXXXXPXXFXXG---FFXPPP--- 918
PP FF PP F P F G P F G F PPP
Sbjct: 291 PPFGFFPPPPRGHF--------PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPM 342
Query: 917 -LXGGXPPPXGXTPPXXFKXP--PPXPGG 840
GG PP PP F P PP GG
Sbjct: 343 MFRGGPYPPFFPPPPPHFMRPSSPPTDGG 371
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 3.1
Identities = 29/89 (32%), Positives = 29/89 (32%), Gaps = 9/89 (10%)
Frame = -3
Query: 1079 PPXXFFXPPXXPFFFXFXXXXXPGXNFFFXGGXXKXXXXXXPXXFXXG---FFXPPP--- 918
PP FF PP F P F G P F G F PPP
Sbjct: 291 PPFGFFPPPPRGHF--------PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPM 342
Query: 917 -LXGGXPPPXGXTPPXXFKXP--PPXPGG 840
GG PP PP F P PP GG
Sbjct: 343 MFRGGPYPPFFPPPPPHFMRPSSPPTDGG 371
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 193 GGGXFXGGXXPXGGGXXXPPXPPXXXXG 276
GGG GG GGG PP PP G
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 193 GGGXFXGGXXPXGGGXXXPPXPPXXXXG 276
GGG GG GGG PP PP G
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 262 GGGXGGXXXPPXKGXXPPXXPPPXXXGXGXXGGG 161
GGG GG G PP PP G G GGG
Sbjct: 39 GGGCGGGGGCGG-GCAPPPPPPACGGGCGGGGGG 71
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 262 GGGXGGXXXPPXKGXXPPXXPPPXXXGXGXXGGG 161
GGG GG G PP PP G G GGG
Sbjct: 96 GGGCGGGGGCGG-GCAPPPPPPACGGGCGGGGGG 128
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 262 GGGXGGXXXPPXKGXXPPXXPPPXXXGXGXXGGG 161
GGG GG G PPP G G GGG
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 933 FXPPPPXWGXPPPXXXNPP 877
F PPPP W PPP PP
Sbjct: 53 FGPPPP-WDRPPPPWRRPP 70
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 956 PXXFXXGFFXPPPLXGGXPPPXGXTPP-XXFKXPPPXP 846
P F G PP + G PP PP F PPP P
Sbjct: 24 PPCFGIGCNQPPIVIAGPPPCFDCPPPAPIFVAPPPPP 61
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -3
Query: 938 GFFXPPPLXGGXPPPXGXTP--PXXFKXPPPXPGGKXG 831
G + PPP PPP G TP P PPP P + G
Sbjct: 294 GMWPPPP-----PPPPGRTPGPPGMPGMPPPPPPSRFG 326
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -3
Query: 938 GFFXPPPLXGGXPPPXGXTP--PXXFKXPPPXPGGKXG 831
G + PPP PPP G TP P PPP P + G
Sbjct: 304 GMWPPPP-----PPPPGRTPGPPGMPGMPPPPPPSRFG 336
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 926 PPPLXGGXPPPXGXTPPXXFKXPPPXPGGK 837
PPP PPP PP PP P K
Sbjct: 176 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTK 205
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 570 PXXGGXXPXPPPKPRXPXFFXGGXGXGPKXKXPFXPGXG 454
P GG PPP R P GG G P PG G
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 924 PPPXWGXPPPXXXNPPG 874
PPP WG PPP P G
Sbjct: 120 PPPPWGPPPPGPPPPFG 136
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 570 PXXGGXXPXPPPKPRXPXFFXGGXGXGPKXKXPFXPGXG 454
P GG PPP R P GG G P PG G
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 927 PPPPXWGXPPPXXXNPPGXF*KXPP 853
PPPP G PPP P G PP
Sbjct: 719 PPPPGVGPPPPQGIPPMGFDPNKPP 743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,856,095
Number of Sequences: 27780
Number of extensions: 323573
Number of successful extensions: 2546
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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