Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D16.2
         (1531 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1032 - 29861859-29862011,29862347-29862470,29862557-298627...    46   6e-05
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148...    29   9.7  

>03_05_1032 - 29861859-29862011,29862347-29862470,29862557-29862759,
            29863081-29863199,29863489-29863623,29863695-29863950,
            29864749-29864880,29865001-29865222
          Length = 447

 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +1

Query: 1102 LTLNPERYTGYKGXSAHRIWRSIYQE 1179
            L LNPERYTGY G SA RIW S+Y+E
Sbjct: 219  LQLNPERYTGYTGDSARRIWDSVYKE 244


>04_04_1192 +
           31611804-31612113,31612235-31614058,31614098-31614842,
           31615047-31616835,31617136-31617163,31617343-31617794
          Length = 1715

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -1

Query: 847 QVHFSFRASSLIWQ*FSLXHLLFIRPRNGPFPFFKIDPYXKTEVSXXRDYNXWXAGEQXL 668
           +VHF+F     +W      HL +I   NG   F K   + +TE    R YN    G    
Sbjct: 659 RVHFAFMLIDALWNSIKPFHLRYIEFFNGSITFEK-SCWWETE-DGPRIYNVDPQGSS-- 714

Query: 667 SXLIDRKFN 641
           S L+ R+ N
Sbjct: 715 SNLVPRRIN 723


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,987,592
Number of Sequences: 37544
Number of extensions: 318404
Number of successful extensions: 436
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4919293792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)