Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_D15.2
(1494 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 36 0.11
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 35 0.14
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 30 4.1
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 30 5.4
02_01_0475 + 3422629-3422695,3422960-3423216 30 5.4
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 29 7.2
11_04_0350 - 16658497-16659015 29 9.5
>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -3
Query: 1393 FFFFFFFFXXXPPXXFFFFFFFXK 1322
FFFFFFFF FFFFFFF +
Sbjct: 65 FFFFFFFFFFFFFFFFFFFFFFDR 88
Score = 35.1 bits (77), Expect = 0.14
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 1393 FFFFFFFFXXXPPXXFFFFFFF 1328
FFFFFFFF FFFFFFF
Sbjct: 62 FFFFFFFFFFFFFFFFFFFFFF 83
Score = 35.1 bits (77), Expect = 0.14
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 1393 FFFFFFFFXXXPPXXFFFFFFF 1328
FFFFFFFF FFFFFFF
Sbjct: 63 FFFFFFFFFFFFFFFFFFFFFF 84
Score = 35.1 bits (77), Expect = 0.14
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 1393 FFFFFFFFXXXPPXXFFFFFFF 1328
FFFFFFFF FFFFFFF
Sbjct: 64 FFFFFFFFFFFFFFFFFFFFFF 85
Score = 34.3 bits (75), Expect = 0.25
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3
Query: 1444 KKXXFFFFFXFXPPXXXFFFFFFFF 1370
K+ FFFFF F FFFFFFFF
Sbjct: 59 KEDFFFFFFFFFFFFFFFFFFFFFF 83
Score = 34.3 bits (75), Expect = 0.25
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -1
Query: 1443 KKXXFFFFFXFXPPXXXFFFFFFFF 1369
K+ FFFFF F FFFFFFFF
Sbjct: 59 KEDFFFFFFFFFFFFFFFFFFFFFF 83
Score = 33.9 bits (74), Expect = 0.33
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -3
Query: 1447 KKKXXFFFFFXFXPPXXXFFFFFFFF 1370
K+ FFFFF F FFFFFFFF
Sbjct: 59 KEDFFFFFFFFFFFFFFFFFFFFFFF 84
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3
Query: 1432 FFFFFXFXPPXXXFFFFFFFF 1370
FFFFF F FFFFFFFF
Sbjct: 65 FFFFFFFFFFFFFFFFFFFFF 85
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 1431 FFFFFXFXPPXXXFFFFFFFF 1369
FFFFF F FFFFFFFF
Sbjct: 65 FFFFFFFFFFFFFFFFFFFFF 85
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3
Query: 1432 FFFFFXFXPPXXXFFFFFFFF 1370
FFFFF F FFFFFFFF
Sbjct: 66 FFFFFFFFFFFFFFFFFFFFF 86
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 1431 FFFFFXFXPPXXXFFFFFFFF 1369
FFFFF F FFFFFFFF
Sbjct: 66 FFFFFFFFFFFFFFFFFFFFF 86
>05_03_0496 + 14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 35.1 bits (77), Expect = 0.14
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 1393 FFFFFFFFXXXPPXXFFFFFFF 1328
FFFFFFFF FFFFFFF
Sbjct: 87 FFFFFFFFFFFFFFFFFFFFFF 108
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3
Query: 1432 FFFFFXFXPPXXXFFFFFFFF 1370
FFFFF F FFFFFFFF
Sbjct: 87 FFFFFFFFFFFFFFFFFFFFF 107
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 1431 FFFFFXFXPPXXXFFFFFFFF 1369
FFFFF F FFFFFFFF
Sbjct: 87 FFFFFFFFFFFFFFFFFFFFF 107
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3
Query: 1432 FFFFFXFXPPXXXFFFFFFFF 1370
FFFFF F FFFFFFFF
Sbjct: 88 FFFFFFFFFFFFFFFFFFFFF 108
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 1431 FFFFFXFXPPXXXFFFFFFFF 1369
FFFFF F FFFFFFFF
Sbjct: 88 FFFFFFFFFFFFFFFFFFFFF 108
Score = 30.7 bits (66), Expect = 3.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -3
Query: 1393 FFFFFFFFXXXPPXXFFFFFFF 1328
+ FFFFFF FFFFFFF
Sbjct: 85 YAFFFFFFFFFFFFFFFFFFFF 106
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +2
Query: 1370 KKKKKKKKXXXGGXKXKKKKKXXF 1441
KKKKKKKK K KKKKK F
Sbjct: 379 KKKKKKKKKKKKKKKKKKKKKLRF 402
Score = 29.1 bits (62), Expect = 9.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +2
Query: 1370 KKKKKKKKXXXGGXKXKKKKKXXFFF 1447
KKKKKKKK K KKKKK F
Sbjct: 377 KKKKKKKKKKKKKKKKKKKKKKKLRF 402
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 29.9 bits (64), Expect = 5.4
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2
Query: 1358 GXXXKKKKKKKKXXXGGXKXKKKKK 1432
G KKKKKKKK K KKKKK
Sbjct: 25 GLPKKKKKKKKKKKKKKKKKKKKKK 49
>02_01_0475 + 3422629-3422695,3422960-3423216
Length = 107
Score = 29.9 bits (64), Expect = 5.4
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2
Query: 1358 GXXXKKKKKKKKXXXGGXKXKKKKK 1432
G KKKKKKKK K KKKKK
Sbjct: 42 GKKKKKKKKKKKKKKKKKKKKKKKK 66
>02_04_0516 + 23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 29.5 bits (63), Expect = 7.2
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +2
Query: 1370 KKKKKKKKXXXGGXKXKKKKK 1432
KKKKKKKK K KKKKK
Sbjct: 77 KKKKKKKKKKKKNKKKKKKKK 97
Score = 29.5 bits (63), Expect = 7.2
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +2
Query: 1370 KKKKKKKKXXXGGXKXKKKKK 1432
KKKKKKKK K KKKKK
Sbjct: 78 KKKKKKKKKKKNKKKKKKKKK 98
>11_04_0350 - 16658497-16659015
Length = 172
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 1370 KKKKKKKKXXXGGXKXKKKKKXXF 1441
KKKKKKKK K KKKKK +
Sbjct: 34 KKKKKKKKKKKKKKKKKKKKKVRY 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,540,509
Number of Sequences: 37544
Number of extensions: 112734
Number of successful extensions: 684
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4780068496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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