Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D12.2
         (1277 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0650 - 26423829-26424179,26424379-26424612,26424961-264252...    30   3.4  
01_06_0104 + 26486155-26486328,26486903-26486995                       30   3.4  

>03_05_0650 -
           26423829-26424179,26424379-26424612,26424961-26425236,
           26425372-26425648,26425751-26425764,26425843-26425989,
           26426306-26426366,26426570-26426604,26426688-26426882,
           26428230-26428439,26428865-26428940,26429519-26429799
          Length = 718

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 474 DTFSCNDCGKINKYNLEEYVKNSINYQIGKLIKAVNNA 587
           ++ SC       KY++  Y+ + I Y++GKL K V  A
Sbjct: 155 ESISCTVESFFTKYHVSSYLSHQIIYKVGKLQKIVTGA 192


>01_06_0104 + 26486155-26486328,26486903-26486995
          Length = 88

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 374 FDGRGGLVVQKSQKDHAQSDPSQRSRENTS 463
           FDG  G V+ ++Q+DH +    Q S  NTS
Sbjct: 4   FDGLRGSVLAQTQQDHIEDKKQQTSNANTS 33


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,404,236
Number of Sequences: 37544
Number of extensions: 424074
Number of successful extensions: 1008
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)