Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D10.2
         (1271 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273...    30   4.5  
06_01_0630 - 4598804-4599295,4599627-4599965,4600002-4600039,460...    30   4.5  
10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931...    29   5.9  

>08_02_0210 +
           14324539-14324609,14324735-14325740,14325838-14327390,
           14327473-14327601,14328345-14328510
          Length = 974

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +3

Query: 348 AMXLERCYAIYGCFSKAYPWTEHRTR*LFPCICRVNGNTVSNFYSP 485
           A+  E C  +       +PW EHR      C C +  N V  F  P
Sbjct: 553 AISSEACKGLENAVKSVFPWAEHR-----ECFCHLMQNFVEKFPGP 593


>06_01_0630 -
           4598804-4599295,4599627-4599965,4600002-4600039,
           4600145-4600460,4600541-4600794,4601586-4601651,
           4603422-4603617
          Length = 566

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 613 IENLANALLDIDGNESATVIIVDWRGGSQPPYGQAVAN 726
           + NL+ A+LD+ G +  + I   W G +  P   A+ N
Sbjct: 412 VHNLSTAILDVTGGDEGSRIEAKWFGTTAAPPSYAIPN 449


>10_08_1025 -
           22391267-22391767,22392641-22392736,22392838-22393106,
           22393257-22393431,22393503-22393718,22393819-22393926,
           22394020-22394544,22394631-22394819,22394924-22395041,
           22395172-22395437,22395521-22395658
          Length = 866

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 29/121 (23%), Positives = 51/121 (42%)
 Frame = +1

Query: 358 WSAVMPSTDVFLKPTRGRSTEPDNYFPASVESMAIRYPTFTRRNRKIPVLLHADNTDRIQ 537
           W+A+  ST   ++ T  ++TEP    P+ V   A+        ++++  LL AD   R Q
Sbjct: 612 WTALSDSTQDTIRVTTRKNTEPGQ--PSGVILTAVSTSWLPFTHQQVFELL-ADEQQRCQ 668

Query: 538 NANLDANGPFYFISHGFLEGGHKKWIENLANALLDIDGNESATVIIVDWRGGSQPPYGQA 717
              L   G  + ++H    G H +   +L    ++   N S  V ++     + P  G  
Sbjct: 669 LEILSNGGSLHEVAH-IANGSHPRNCISLLR--INAASNSSQNVELLLQESSTHPDGGSL 725

Query: 718 V 720
           V
Sbjct: 726 V 726


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,937,604
Number of Sequences: 37544
Number of extensions: 546770
Number of successful extensions: 1151
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3945842028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)