Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D10.2
         (1271 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022978-9|AAG24185.1|  353|Caenorhabditis elegans Seven tm rece...    30   3.0  
AC006769-8|AAF60581.1|  431|Caenorhabditis elegans Hypothetical ...    29   7.0  
AC006645-1|AAF39843.1|  418|Caenorhabditis elegans Hypothetical ...    29   7.0  

>AF022978-9|AAG24185.1|  353|Caenorhabditis elegans Seven tm
           receptor protein 256 protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = +1

Query: 655 ESATVIIVDWRGGSQPPYGQAVANIRLVG-------VMTAHLIHNIYEVLQLPHIDNF 807
           ESA  +IV+W+    P +   V ++  VG       ++  H I+  + +   PH+ +F
Sbjct: 67  ESAFFLIVNWKESLFPKFVVCVLDLLFVGCFGFSIAILALHFIYRFFSITNNPHLKSF 124


>AC006769-8|AAF60581.1|  431|Caenorhabditis elegans Hypothetical
           protein Y45G12C.4 protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = +1

Query: 610 WIENLANALLDIDGNESATVIIVDWRGGSQPPYGQAVANIRLVGVMTAH-LIHNIYEVLQ 786
           W  N+ + L D  GN     II DW+G S  P G  +A + L+G +TA+       E+L 
Sbjct: 287 WQSNMLHCL-DEHGNLVLKAII-DWQGVSMLPPGLDLARL-LMGCLTAYERRERGAELLM 343

Query: 787 LPHIDNFHFIGHSLGAHLGGYCGHELQKKFNL 882
           L H      +G  L      +   ELQ  +NL
Sbjct: 344 LYHQTFTGIVGEEL------FSLEELQDSYNL 369


>AC006645-1|AAF39843.1|  418|Caenorhabditis elegans Hypothetical
           protein F56A4.5 protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = +1

Query: 610 WIENLANALLDIDGNESATVIIVDWRGGSQPPYGQAVANIRLVGVMTAH-LIHNIYEVLQ 786
           W  N+ + L D  GN     II DW+G S  P G  +A + L+G +TA+       E+L 
Sbjct: 274 WQSNMLHCL-DEHGNLVLKAII-DWQGVSMLPPGLDLARL-LMGCLTAYERRERGAELLM 330

Query: 787 LPHIDNFHFIGHSLGAHLGGYCGHELQKKFNL 882
           L H      +G  L      +   ELQ  +NL
Sbjct: 331 LYHQTFTGIVGEEL------FSLEELQDSYNL 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,695,729
Number of Sequences: 27780
Number of extensions: 431848
Number of successful extensions: 939
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3547715720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)