Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D10.2
         (1271 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   9.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   9.9  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 746 ITPTNLILATACPYGGWEPPRQSTMITVADSLPS 645
           +  TN+ L+T CPY  +       +  VA S+P+
Sbjct: 624 LNSTNVTLSTKCPYPSYY-SYIGVLTLVATSMPT 656


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -3

Query: 540 ILYSVRIIGMKQHWYFPVPASKSWIP 463
           ++Y +  IG+  +++F   A   W+P
Sbjct: 220 LIYFIEDIGLNTYYFFLRQAFPFWLP 245


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 691 GSQP-PYGQAVANIRLVGVMTAHLIHNIYE 777
           G +P P+     ++ LV   TAH + +IYE
Sbjct: 36  GPKPVPFFGTTKDLILVKKSTAHFVKDIYE 65


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,818
Number of Sequences: 438
Number of extensions: 5935
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43582869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)