Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D08.2
         (1253 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical p...   128   1e-29
Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical pr...   128   1e-29
Z49911-12|CAD30448.1|  137|Caenorhabditis elegans Hypothetical p...    79   7e-15
Z36948-7|CAD30436.1|  137|Caenorhabditis elegans Hypothetical pr...    79   7e-15
Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical pr...    31   2.3  
Z81549-6|CAB04475.1|  523|Caenorhabditis elegans Hypothetical pr...    29   9.1  

>Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score =  128 bits (308), Expect = 1e-29
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 4/257 (1%)
 Frame = +3

Query: 222 VXQVXNIAPQAXKXQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVA 401
           +  V NI+  A +  +  +F YLGKI D+++YP+  +++     +  ++K+ D   V VA
Sbjct: 11  ILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEVA 70

Query: 402 QHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL-DG 578
           QH+TNTV ID A++ +P  +  IPDE      +S G+   G    + +LP HV N + + 
Sbjct: 71  QHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKIQES 124

Query: 579 IPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVAD-TGSLTSQQLIDHF- 752
              + ++ T D  L   G           DS K+EEIRRTV V +    +   ++++ F 
Sbjct: 125 DDGSALLITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFN 184

Query: 753 CQAGEVKYMRFCS-RDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICK 929
              GEV Y R  S  D     YA +E ++Q +V  AL  +G     + +++ H+  +I K
Sbjct: 185 MYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIK 244

Query: 930 PXTKSNEAAQREIXXAM 980
           P  K++E A  EI  A+
Sbjct: 245 PQAKTDEQALGEIEEAI 261


>Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score =  128 bits (308), Expect = 1e-29
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 4/257 (1%)
 Frame = +3

Query: 222 VXQVXNIAPQAXKXQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVA 401
           +  V NI+  A +  +  +F YLGKI D+++YP+  +++     +  ++K+ D   V VA
Sbjct: 11  ILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEVA 70

Query: 402 QHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL-DG 578
           QH+TNTV ID A++ +P  +  IPDE      +S G+   G    + +LP HV N + + 
Sbjct: 71  QHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKIQES 124

Query: 579 IPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVAD-TGSLTSQQLIDHF- 752
              + ++ T D  L   G           DS K+EEIRRTV V +    +   ++++ F 
Sbjct: 125 DDGSALLITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFN 184

Query: 753 CQAGEVKYMRFCS-RDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICK 929
              GEV Y R  S  D     YA +E ++Q +V  AL  +G     + +++ H+  +I K
Sbjct: 185 MYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIK 244

Query: 930 PXTKSNEAAQREIXXAM 980
           P  K++E A  EI  A+
Sbjct: 245 PQAKTDEQALGEIEEAI 261


>Z49911-12|CAD30448.1|  137|Caenorhabditis elegans Hypothetical
           protein D2089.1b protein.
          Length = 137

 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 40/117 (34%), Positives = 66/117 (56%)
 Frame = +3

Query: 222 VXQVXNIAPQAXKXQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVA 401
           +  V NI+  A +  +  +F YLGKI D+++YP+  +++     +  ++K+ D   V VA
Sbjct: 11  ILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEVA 70

Query: 402 QHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL 572
           QH+TNTV ID A++ +P  +  IPDE      +S G+   G    + +LP HV N +
Sbjct: 71  QHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKI 121


>Z36948-7|CAD30436.1|  137|Caenorhabditis elegans Hypothetical
           protein D2089.1b protein.
          Length = 137

 Score = 79.0 bits (186), Expect = 7e-15
 Identities = 40/117 (34%), Positives = 66/117 (56%)
 Frame = +3

Query: 222 VXQVXNIAPQAXKXQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVA 401
           +  V NI+  A +  +  +F YLGKI D+++YP+  +++     +  ++K+ D   V VA
Sbjct: 11  ILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEVA 70

Query: 402 QHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL 572
           QH+TNTV ID A++ +P  +  IPDE      +S G+   G    + +LP HV N +
Sbjct: 71  QHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKI 121


>Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical
           protein F35H8.5 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 702 LVADTGSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQ-EAVIKALHLNGST 878
           L +DT      QL   F     VK +R  ++      YA + M+   EA    L LNG+ 
Sbjct: 381 LSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKG--YAFVSMSNYTEAYNAMLSLNGTN 438

Query: 879 LDGQTIQV 902
           L G+T+QV
Sbjct: 439 LAGKTLQV 446


>Z81549-6|CAB04475.1|  523|Caenorhabditis elegans Hypothetical
           protein F55C9.7 protein.
          Length = 523

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
 Frame = -1

Query: 833 SHLNKSILEGVNISAAEAHILHFTC----LAEVINQLLGS**TRISH*DCSSDFFYFSRV 666
           SH  KSI E ++  A     L+F      L  ++NQ  GS      + D   +  + +++
Sbjct: 350 SHNWKSIHEALDGVACSHTSLYFQSQDVWLQRIVNQFSGS----FLYLDLDVNSIWNNQI 405

Query: 665 ICGWQRGIWRQTSCCQISVVRLNDLVRRDSIQSID 561
           +C  +R ++  TSC ++  V    L     ++++D
Sbjct: 406 MCTNRRNLYISTSCTELLSVNCTHLHVNQRVRAVD 440


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,444,315
Number of Sequences: 27780
Number of extensions: 427817
Number of successful extensions: 925
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)