Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D08.2
         (1253 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   5.6  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   5.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   5.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   5.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   5.6  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   7.4  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 558 HAWAVLVLQNLTPVPRFHYW 499
           H W  L L+N+ P   ++ W
Sbjct: 129 HEWFQLSLKNIEPYNNYYIW 148


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 348 QSRICYVKYYDSANVNVAQHMTNTVFIDRA 437
           + + CY  Y+ S   +  +H+T   F  RA
Sbjct: 384 KEKTCYYPYHPSTQEDSEEHLTPKRFHSRA 413


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 348 QSRICYVKYYDSANVNVAQHMTNTVFIDRA 437
           + + CY  Y+ S   +  +H+T   F  RA
Sbjct: 384 KEKTCYYPYHPSTQEDSEEHLTPKRFHSRA 413


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 473 WYLTRLHRYHNQCAVYEYS 417
           W +T  HR + +C++ E+S
Sbjct: 72  WTITSYHRINLKCSLVEFS 90


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 558 HAWAVLVLQNLTPVPRFHYW 499
           H W  L L+N+ P   ++ W
Sbjct: 129 HEWFQLSLKNIEPYNNYYIW 148


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 650 RGIWRQTSCCQISVVRLNDLVRRDS 576
           R  ++QT CC+  ++     V R+S
Sbjct: 336 RNAFKQTICCKTRIIGRRSWVTRES 360


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,621
Number of Sequences: 438
Number of extensions: 4928
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42862491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)