Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D07.2
         (1304 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0068 - 495582-497981                                             31   2.0  
07_01_0040 + 325737-328181                                             29   8.1  

>07_01_0068 - 495582-497981
          Length = 799

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -2

Query: 229 SVWKVAPSCWNHMFARSIPSILGHKKFVIIVRYWSILTVAWLLLAHL 89
           ++W+V    W  M   +     G      + R   ++T+AW L+AH+
Sbjct: 729 TMWRVVAGVWREMLTYAAGKCQGSTHVRQLSRGGELITMAWFLMAHM 775


>07_01_0040 + 325737-328181
          Length = 814

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -2

Query: 229 SVWKVAPSCWNHMFARSIPSILGHKKFVIIVRYWSILTVAWLLLAHL 89
           ++W+V    W  M   +     G      + R   ++T+ W L+AH+
Sbjct: 746 TMWRVVAGVWREMLTYAAGKCHGSTHVRQLSRGGELITLVWFLMAHM 792


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,682,777
Number of Sequences: 37544
Number of extensions: 487972
Number of successful extensions: 1706
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4073878200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)