Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D07.2
         (1304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   1.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   2.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   7.7  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +1

Query: 397 LFMQRFHTKLVYQDTPPTAE--WRRPFARNYIPHLMSFNTL 513
           L + R++ + +  D P   E  W++PF   Y P +   N L
Sbjct: 265 LLLNRYYLERLSNDLPHLEEFDWQKPFYPGYYPTMTYSNGL 305


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +1

Query: 397 LFMQRFHTKLVYQDTPPTAE--WRRPFARNYIPHLMSFNTL 513
           L + R++ + +  D P   E  W++PF   Y P +   N L
Sbjct: 265 LLLNRYYLERLSNDLPYLEEFDWQKPFYPGYYPTMTYSNGL 305


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -2

Query: 274 TKPSNFSSNKFNVSRSVWKVAPSCWNHM 191
           T P   +  KF  +  VW +   CW  M
Sbjct: 805 TAPEAIAFRKFTSASDVWSMGIVCWEVM 832


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 685 GTXXPPPKGXPPPP 644
           G    PPK  PPPP
Sbjct: 333 GDSDTPPKPAPPPP 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,171
Number of Sequences: 438
Number of extensions: 5007
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 44903562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)