Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D05.2
         (1307 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    61   8e-11
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     26   2.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   2.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   8.5  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 60.9 bits (141), Expect = 8e-11
 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +1

Query: 445 VLAAPLHWSNESRERLVKCAELAGFEVLQVISEPAAALLAYNIEENLE-DVNVLIYRLGG 621
           V+  P ++++  R+       +AG  V+++I+EP AA LAY +++NL+ + NVLI+ LGG
Sbjct: 3   VITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGG 62

Query: 622 SSCDVSIAKVSAG 660
            + DVSI  +  G
Sbjct: 63  GTFDVSILTIDEG 75


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 682 IFRSDLGGQYLTKDLADFIAQE 747
           I RSD GG+Y  K L  F A E
Sbjct: 404 IIRSDQGGEYSNKALRKFCADE 425


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +1

Query: 400  TXASHSVKHEGDLKLVLAAPLHWSN--ESRERLVKCAELAGFEVLQVISEPAAALLAYNI 573
            T   H V  E  L+ +L +P +WSN  E+ +R+    +    E  + ++E  A  +A N 
Sbjct: 1041 TELLHGVVPETLLEHMLQSPENWSNVCEATKRITSALQQDWDETRRELAEQGAPRVADN- 1099

Query: 574  EENLEDVNVLIYRLGGSS 627
            + N ++    +Y    +S
Sbjct: 1100 QHNQDNDRTSLYSARNTS 1117


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 8.5
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
 Frame = +1

Query: 682 IFRSDLGGQYLTKDLADF-----IAQEFKQKWKLDPQESKRAMAKLLNHADNCKNVLSTL 846
           + RSD GG+Y +K L  F     I  +F   +   PQ++  A  K     +  + +L   
Sbjct: 139 VIRSDQGGEYKSKRLGQFYRAKGIVPQFTAGY--SPQQNGVAERKNRTLVEMARCMLIDA 196

Query: 847 NSAHVFIESLLDGVDWSQNVS 909
              + F    ++   + QN+S
Sbjct: 197 KLGYRFWAEAINAAVYLQNIS 217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,335
Number of Sequences: 2352
Number of extensions: 14261
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 150827643
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)