Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_D04.2
         (1237 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical pr...   252   4e-67
AL132904-5|CAC35837.2|  406|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical pr...    29   9.0  
AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate cyc...    29   9.0  
AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical ...    29   9.0  

>Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical
           protein F32G8.6 protein.
          Length = 223

 Score =  252 bits (617), Expect = 4e-67
 Identities = 121/170 (71%), Positives = 140/170 (82%)
 Frame = +1

Query: 484 REALLPDMANSYRLLLTGLGEDPERAGLLKTPERAAKAMLFFTKGYDQSLEEVLNNAIFD 663
           +E  L  M N+Y+ ++  +GED  R GLLKTPERAAKAM+ FTKGYD  L+E+LN A+FD
Sbjct: 36  KEDHLKSMCNAYQSIIQHVGEDINRQGLLKTPERAAKAMMAFTKGYDDQLDELLNEAVFD 95

Query: 664 EDTDEMVVVKDIEMFSMCEHHLVPFYGKVSIGYLPQGKILGLSKLARIVEIFSRRLQVQE 843
           ED DEMV+VKDIEMFS+CEHHLVPF GKV IGY+P  K+LGLSKLARIVE+FSRRLQVQE
Sbjct: 96  EDHDEMVIVKDIEMFSLCEHHLVPFMGKVHIGYIPNKKVLGLSKLARIVEMFSRRLQVQE 155

Query: 844 RLTKQIAIAVTQAVRPAGVAVVIEGVHMCMVMRGVXXINSKTVXSTMLGV 993
           RLTKQIA A+ QAV+P+GVAVVIE  HMCMVMRGV  IN+ T  S MLGV
Sbjct: 156 RLTKQIATAMVQAVQPSGVAVVIEASHMCMVMRGVQKINASTTTSCMLGV 205


>AL132904-5|CAC35837.2|  406|Caenorhabditis elegans Hypothetical
           protein Y111B2A.9a protein.
          Length = 406

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = -1

Query: 502 PVTTPPWWAVCGPVPGHGGRCSSRDQAW----SKSSASLAFRALQVHFPHRPS*SSSGLL 335
           PV +PP    CG + G+  R  S  +A      +SS SL    L V FP  PS SS+   
Sbjct: 106 PVCSPPPEVFCGSIVGNQMRNRSNSEAQPGLRMRSSHSLGNGGLLVFFPTSPSSSSNNSG 165

Query: 334 ELFCIYQRTSPSEE 293
            L   ++R S ++E
Sbjct: 166 HLL-QHRRESHTDE 178


>Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 553 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 726
           +R+  + T ER  + ++F  K    DQS EE L  A+     +  + +  ++  S   +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231

Query: 727 LV 732
           +V
Sbjct: 232 MV 233


>AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 553 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 726
           +R+  + T ER  + ++F  K    DQS EE L  A+     +  + +  ++  S   +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231

Query: 727 LV 732
           +V
Sbjct: 232 MV 233


>AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 553 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 726
           +R+  + T ER  + ++F  K    DQS EE L  A+     +  + +  ++  S   +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231

Query: 727 LV 732
           +V
Sbjct: 232 MV 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,612,226
Number of Sequences: 27780
Number of extensions: 473521
Number of successful extensions: 1161
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)