Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C24.2
         (1249 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.49 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   4.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   6.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.49
 Identities = 22/74 (29%), Positives = 24/74 (32%)
 Frame = -1

Query: 454 PPPPPPXXEKKXKPPFXXXFFFPPXXGXXKXXXXPXFXXKTFFXXPFFXXXXPXXXXFFX 275
           PPPPPP       PP     F PP     +    P    +  F   F     P       
Sbjct: 531 PPPPPPGGAVLNIPP----QFLPPPLNLLRAPFFPLNPAQLRFPAGF-----PNLPNAQP 581

Query: 274 FXGPXPPPXGGXPP 233
              P PPP  G PP
Sbjct: 582 PPAPPPPPPMGPPP 595



 Score = 24.6 bits (51), Expect = 6.1
 Identities = 19/60 (31%), Positives = 19/60 (31%)
 Frame = -3

Query: 665 APFXPLFXXFFXXXXPPFXGXPXXPPXGGXNPXPPPXXXGPGFFXGGXGXGPXXXXPXPP 486
           APF PL           F   P   P     P PPP    P    GG   GP    P  P
Sbjct: 557 APFFPLNPAQLRFPAG-FPNLPNAQPPPAP-PPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 14/46 (30%), Positives = 14/46 (30%)
 Frame = +2

Query: 437 GGGGGGXFXXXKXPPXXGXXGXXXGGPXPXPPXKXXGPGXXGGGXG 574
           G  GGG           G  G   GGP         G    GGG G
Sbjct: 821 GASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSG 866


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +1

Query: 484 PGGXGXXFXGPXPXPPXKXPGPXXXGGGXGFXPPXGGXXGFPKKGG 621
           PGG       P P  P    GP    G  GF    G       KGG
Sbjct: 403 PGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMGPKGG 448


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 536 KXXGPGXXGGGXGXPPPXGGKXXSXKKG 619
           K   PG  GGG G   P GG   S   G
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPG 223



 Score = 24.2 bits (50), Expect = 8.0
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 548 PGXXGGGXGXPPPXGG 595
           PG  GG  G P P GG
Sbjct: 212 PGGGGGSSGGPGPGGG 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.150    0.487 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,001
Number of Sequences: 2352
Number of extensions: 16571
Number of successful extensions: 62
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142652703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)