Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C21.2
(1278 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0097 + 20845417-20845518,20845728-20846581,20846666-208467... 37 0.030
07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149 34 0.21
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 32 0.84
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 31 1.5
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 31 1.9
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 31 2.6
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 3.4
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 30 3.4
04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179 30 3.4
07_03_1165 - 24459156-24460139 30 4.5
01_05_0421 + 21990034-21990392,21991691-21992681 30 4.5
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 29 5.9
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 29 5.9
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 29 7.9
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 7.9
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 29 7.9
01_01_0990 + 7847066-7847478,7847713-7848679 29 7.9
>09_06_0097 +
20845417-20845518,20845728-20846581,20846666-20846726,
20847320-20847358,20847602-20847682
Length = 378
Score = 37.1 bits (82), Expect = 0.030
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 476 RRHVQLRHGKRNG*SENGGKMQHLRKIISNREEIAETSRQKAHDRIREAKETRLV 640
RR ++ N + ++Q + I + RE+ A+ Q AHDR+R+A R+V
Sbjct: 93 RRDAEIAKANANEFEKKANQLQIIADIETEREQSAKKKEQAAHDRLRDASTARIV 147
>07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149
Length = 282
Score = 34.3 bits (75), Expect = 0.21
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +3
Query: 510 MVDPKMA---VKCNI-CEKSYPTEKKLL-KHQDKKHMI--VYERPKKRVSFSDHVIVHEV 668
M D +MA +K N+ CEK +K+L K +DK+ +I VYE RV S H E+
Sbjct: 1 MADKQMASLIIKANLECEKCCKKIQKVLNKLKDKEKIINIVYENSNNRVIISGHFKPEEL 60
Query: 669 KEYHKCRKC 695
+C+ C
Sbjct: 61 AHKLRCKAC 69
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Frame = +3
Query: 771 CNYCNKKFVDRVFFKVHIKL------HCDVCGLLFSSKLKYLQHR 887
C+ C+KK+ + +K H K+ CD CG +FS K ++ HR
Sbjct: 144 CDRCSKKYAVQSDWKAHTKICGTKEYRCD-CGTIFSRKDSFITHR 187
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = +3
Query: 771 CNYCNKKFVDRVFFKVHIK------LHCDVCGLLFSSKLKYLQHR 887
C C K++ +K H+K CD CG+LFS K L HR
Sbjct: 126 CERCGKRYAVHSDWKAHVKNCGTREYRCD-CGILFSRKDSLLTHR 169
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 31.1 bits (67), Expect = 1.9
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Frame = +3
Query: 537 CNICEKSYPTEKKLLKHQDKKHMIVYERPKKRVSFSDHVIVHEVKEYHKCRKCPKIFKEY 716
C +C K + E+ L H+ + H + ++ +K + + V+ E P
Sbjct: 45 CEVCNKGFQREQNLQLHR-RGHNLPWKLKQKNPAQAQRRRVYLCPEPTCVHHDPARALGD 103
Query: 717 XXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKL------HCDVCGLLFSSKLKYL 878
+ C+ C+K++ + +K H K+ CD CG LFS + ++
Sbjct: 104 LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYRCD-CGTLFSRRDSFI 162
Query: 879 QHR 887
HR
Sbjct: 163 THR 165
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +3
Query: 771 CNYCNKKFVDRVFFKVHIK------LHCDVCGLLFSSKLKYLQHR 887
C+ C+KK+ + +K H K CD CG LFS + ++ HR
Sbjct: 126 CDKCSKKYAVQSDWKAHTKTCGSREYRCD-CGTLFSRRDSFITHR 169
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 531 VKCNICEKSYPTEKKLLKHQDKKHMIVYERPKKRVSFSDHVIVHEVKEYHK 683
V C C++ + EK L++HQ KH + KK +S + + +H V + HK
Sbjct: 11 VFCYYCDREFDDEKILVQHQKAKHFKCHVCHKK-LSTAGGMAIH-VLQVHK 59
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 560 SNREEIAETSRQKAHDRIREAKE-TRLVLRPRYSSRSER 673
++ E ET RQ+A DR+REA+E ++ +R R + + R
Sbjct: 411 TSSEATRETDRQEAADRLREAEEAAQVAVRARQAEEAAR 449
>04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179
Length = 380
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 498 TENEMVDPKMAVKCNICEKSYPTEKKLLKHQDKKHMIVYERPKKRVSFSDHVIVHEVK 671
T ++ + PK CN+ EK +L++ + K R K R S HV+V K
Sbjct: 260 TNDDEILPKEGYHCNLTEKKEKLANRLVEMEQKPSSKNAPRSKWRPGVSGHVLVQARK 317
>07_03_1165 - 24459156-24460139
Length = 327
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 810 FKVHIKLHCDVCGLLFSSKLKYLQHRHKAGRIQKKHQCRICNESYFRYMDLKDHSLEHLR 989
++ H L V G + K+ AG+ + KH C +C + Y + L H +H R
Sbjct: 183 YESHQGLGGHVAGHINRDKMATASGSGGAGKPKGKHPCNVCGKEYPTGVALGGHKRKHYR 242
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +3
Query: 771 CNYCNKKFVDRVFFKVHIKL------HCDVCGLLFSSKLKYLQHR 887
C+ C+KK+ +K H K+ CD CG +FS + ++ HR
Sbjct: 85 CDKCSKKYAVHSDWKAHSKICGTREYKCD-CGTIFSRRDSFITHR 128
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +3
Query: 450 ATRENTKQVDDTSSSDTENEMVDPKM---AVKCNICEKSYPTEKKLLKHQDKKH 602
AT KQ T +D E PK ++ C C K++ +E L H KH
Sbjct: 141 ATPHPAKQASKTPVNDKSKEK-SPKSGGGSISCKSCSKTFNSEMALQSHSKAKH 193
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +3
Query: 771 CNYCNKKFVDRVFFKVHIKL------HCDVCGLLFSSKLKYLQHR 887
C+ C+K++ +K H K+ CD CG LFS + ++ HR
Sbjct: 153 CDKCSKRYAVHSDWKAHSKVCGTREYRCD-CGTLFSRRDSFITHR 196
>10_08_0961 +
21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 29.1 bits (62), Expect = 7.9
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +3
Query: 312 NDIELYLKRMNKVKSDGNNVKKLHEKRITSLCCVLLQR--------EDFLLFRNATRENT 467
+D E LK + ++++K+I L L + E++ +N E T
Sbjct: 654 SDAEKELKWLRSATGSAEKEYEINQKKIAELKMELERERNERIKLEEEYEEVKNEVSELT 713
Query: 468 KQVDDTSSSDTENEMVDPKMAVKCNIC 548
+ ++T+ ++E+ + K +KC +C
Sbjct: 714 SETEETTIQKLQDEIKECKAILKCGVC 740
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +3
Query: 771 CNYCNKKFVDRVFFKVHIKL------HCDVCGLLFSSKLKYLQHR 887
C+ C+K++ + +K H K CD CG LFS + ++ HR
Sbjct: 126 CDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITHR 169
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 29.1 bits (62), Expect = 7.9
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Frame = +3
Query: 765 YICNY--CNKKFVDRVFFKVHIKLH-------C--DVCGLLFSSKLKY-LQHRHKAGRIQ 908
Y+C+Y C+KKF+D K H +H C + CG + + L + L+ K +
Sbjct: 72 YVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVD 131
Query: 909 KKHQCRI--CNESYFRYMDLKDH 971
H C+ C + + L+ H
Sbjct: 132 NYHVCKYPECARRFTQESKLRAH 154
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +3
Query: 771 CNYCNKKFVDRVFFKVHIKL------HCDVCGLLFSSKLKYLQHR 887
C+ C+K++ + +K H K CD CG LFS + ++ HR
Sbjct: 103 CDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITHR 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,379,568
Number of Sequences: 37544
Number of extensions: 448869
Number of successful extensions: 1338
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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