Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C21.2
         (1278 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    45   5e-06
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    29   0.29 

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 44.8 bits (101), Expect = 5e-06
 Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 15/164 (9%)
 Frame = +3

Query: 537 CNICE----KSYPTEKKLLKH-QDKKHM-IVYERPKKRV-SFSDHVIVHEVKEYHKCRKC 695
           CN C     K +   + L  H +D+ H  +V ER  K + S  +HV  H   + H+C+ C
Sbjct: 129 CNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHC 188

Query: 696 PKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLH-------CDVCGLL 854
              F                   + C  C+   V+    K HI+ H       C  C   
Sbjct: 189 DNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYA 248

Query: 855 FSSKLKYLQH-RHKAGRIQKKHQCRICNESYFRYMDLKDHSLEH 983
              K K  +H R   G  +K + C +C   + +   LK H + H
Sbjct: 249 SPDKFKLTRHMRIHTG--EKPYSCDVCFARFTQSNSLKAHKMIH 290



 Score = 41.5 bits (93), Expect = 5e-05
 Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 16/162 (9%)
 Frame = +3

Query: 534 KCNICEKSYPTEKKLLKHQ-----DKKHM--IVYERPKKRVSFSDHVIVHEV--KEYHKC 686
           +C  C  + P + KL +H      +K +   + + R  +  S   H ++H+V  K   +C
Sbjct: 241 QCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQC 300

Query: 687 RKCPKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLH-------CDVC 845
           + CP                        C  C+  F DR  +K+H K H       C+ C
Sbjct: 301 KLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYC 360

Query: 846 GLLFSSKLKYLQHRHKAGRIQKKHQCRICNESYFRYMDLKDH 971
               S  +++L+        QK ++C  C +++ +   LK H
Sbjct: 361 PYA-SISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRH 401



 Score = 32.3 bits (70), Expect = 0.031
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
 Frame = +3

Query: 765 YICNYCNKKFVDRVFFKVHIKLH-------CDVCGLLFSSKLKYLQHRHKAGRIQKKHQC 923
           Y+CNYCN           H+K H       C VC   F + L  LQ+        K H+C
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKT-LASLQNHVNTHTGTKPHRC 185

Query: 924 RICNESYFRYMDLKDH 971
           + C+  +    +L  H
Sbjct: 186 KHCDNCFTTSGELIRH 201


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 0.29
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 534 KCNICEKSYPTEKKLLKHQDKKHMIVYE 617
           +CN+C+ SY T+ +  KH+ + H I  E
Sbjct: 350 QCNLCDMSYRTKLQYQKHEYEVHRISNE 377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,002,570
Number of Sequences: 2352
Number of extensions: 19230
Number of successful extensions: 89
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 146740173
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)