Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C17.2
(1312 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.010
03_02_0484 + 8805053-8805538 39 0.010
03_02_0483 - 8804021-8804485 39 0.010
03_02_0478 + 8775892-8776377 37 0.031
02_02_0077 - 6586638-6587165 37 0.031
04_04_0017 + 22176759-22177406 36 0.053
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.093
01_01_0229 - 1943473-1943922 35 0.12
01_01_0231 + 1951047-1951499 35 0.16
12_01_0061 + 514798-515967 34 0.29
11_02_0041 - 7669692-7670312 34 0.29
02_05_0494 + 29486960-29487454 33 0.38
01_01_0227 + 1933247-1933699 33 0.66
04_04_0765 - 27910189-27912393,27912521-27912598 31 1.5
03_05_0865 - 28365430-28367640 31 1.5
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 31 1.5
01_01_0599 - 4448290-4448790 31 1.5
02_05_0256 + 27201483-27202499,27203297-27203375,27204617-272049... 30 3.5
01_05_0523 - 22915390-22915901,22916496-22916619,22916708-229168... 30 3.5
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 30 4.6
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 30 4.6
12_02_0643 - 21461123-21461902 29 6.1
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 614
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 614
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 614
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.031
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 608
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.031
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 507 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 659
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>04_04_0017 + 22176759-22177406
Length = 215
Score = 36.3 bits (80), Expect = 0.053
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 507 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 659
+F R+ LP+ A +++ + L + GVLT+ + PD +KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.093
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 605
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 605
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 605
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>12_01_0061 + 514798-515967
Length = 389
Score = 33.9 bits (74), Expect = 0.29
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -1
Query: 703 SWVPSLWSLISLRTGPVCAMGTFLSPLTASGTFLGAVMVRTPSDDSRDSTV 551
SW PS +LISL +G CA F S + A+ FL SDD D TV
Sbjct: 295 SWSPSKLNLISLGSGRFCAAKIFRSNMPAAAAFL------DDSDDDDDYTV 339
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.29
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 507 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 614
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 504 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 608
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.66
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 501 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 608
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 274 LPSPVQCSPKPPSARGANSRLHLVTSAP 357
+PSP + SP PPSA GA + L T P
Sbjct: 554 VPSPPRVSPVPPSASGAGTSLPRTTCTP 581
>03_05_0865 - 28365430-28367640
Length = 736
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 605 EGTRRRQGREKGAHRTDRSRSQGDQGPERGN 697
+ +RR + RE+G DR R +GD+ ERG+
Sbjct: 114 DSSRRDRDRERGDRDRDRDRERGDRDRERGD 144
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 211 WPXSSCCSSFRLGANPVTPCWLPSPVQCSPKPPSARGA 324
WP S C S+ LGA + ++ PV +P+PPS+ GA
Sbjct: 238 WPQSPCLSAVDLGAAILGGQYMHLPVP-APQPPSSPGA 274
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 507 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 647
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>02_05_0256 +
27201483-27202499,27203297-27203375,27204617-27204946,
27205029-27205198
Length = 531
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 262 TPCWLPSPVQCSPKPPSARGANSRLHLVTSAPA 360
TPCW+PSP + + PS A R H++T+ P+
Sbjct: 227 TPCWMPSPARFT--TPS---ATPRHHIITTKPS 254
>01_05_0523 -
22915390-22915901,22916496-22916619,22916708-22916844,
22917383-22917518,22917614-22917951,22919426-22919663
Length = 494
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 596 RAEEGTRRRQGREKGAHRTDRSRSQGDQGPERG 694
R EEG RRR+G+ KGA + + D P G
Sbjct: 8 REEEGRRRRKGKGKGAGEMVLQQEEEDAAPAMG 40
>05_03_0619 +
16274255-16274396,16274775-16274848,16275111-16276139,
16276484-16276702,16277228-16277250,16277482-16277606,
16279480-16279670,16280202-16280360,16281359-16281598
Length = 733
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -2
Query: 558 PQSQAPRLQAARNVGRTA-LKYTRARLSSLRACLPP--RCTRRQXSPKXLPARSAARPD* 388
P+ Q P + R ++ RA + + C+ P R R L A +A+
Sbjct: 598 PRKQMPEFETTRYFNLAGFVEQLRALAAEVGYCITPEYRVVRNFEDKGVLEALWSAKSSP 657
Query: 387 LGTCPCRPL 361
GTCP RPL
Sbjct: 658 YGTCPSRPL 666
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 29.9 bits (64), Expect = 4.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 626 GREKGAHRTDRSRSQGDQGPERGNPGC 706
GR R R + QG++G ERG GC
Sbjct: 73 GRTTTTRRRRRRKQQGEEGEERGERGC 99
>12_02_0643 - 21461123-21461902
Length = 259
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 586 SPSPRRGRYPTPSRERERCPSHRPVPF 666
SPSP RGR TP R R P+ P P+
Sbjct: 211 SPSPLRGRPRTPPPPRPRPPTTPPRPY 237
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,567,264
Number of Sequences: 37544
Number of extensions: 435332
Number of successful extensions: 1917
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4097157504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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