Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C16.2
(1294 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 173 6e-42
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 95 3e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 78 4e-13
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 60 1e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 8e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 49 3e-04
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 48 7e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 40 0.11
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 38 0.57
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 37 0.99
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 36 3.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 173 bits (422), Expect = 6e-42
Identities = 80/107 (74%), Positives = 83/107 (77%)
Frame = +1
Query: 544 SKRPXTVKRPRCWXFSIGSAPLXXIXKIDAQVKGGXTRQXYKXTRRFPLXAPSCALLFRP 723
SK+ T R FSIGSAPL I KIDAQV+GG TRQ YK TRRFPL APSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 724 CRLPDTCPPFSLRETWXFLIXHAVXISIRCRSFAPXWAVCXKPPFXP 864
CRLPDTCPPFSLRE W FLI HAV IS+RCRSFAP WAVC PPF P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 95.5 bits (227), Expect = 3e-18
Identities = 60/112 (53%), Positives = 64/112 (57%)
Frame = +1
Query: 400 GALPXPRSLXRCARSFGXGXRYQLTQRX*YGYPXNQGITQEKXXXQKASKRPXTVKRPRC 579
G +P PRSL R ARSFG G RY+LT G E + SK RPR
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLE-DTRKTLSKEEI---RPRR 81
Query: 580 WXFSIGSAPLXXIXKIDAQVKGGXTRQXYKXTRRFPLXAPSCALLFRPCRLP 735
FSIGSAPL I K DAQ+ GG TRQ YK RRFPL APSCALLF P LP
Sbjct: 82 SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 78.2 bits (184), Expect = 4e-13
Identities = 38/54 (70%), Positives = 40/54 (74%)
Frame = +1
Query: 562 VKRPRCWXFSIGSAPLXXIXKIDAQVKGGXTRQXYKXTRRFPLXAPSCALLFRP 723
V+ PR FSIGSAPL I K DAQ+ GG TRQ YK TRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 60.1 bits (139), Expect = 1e-07
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -2
Query: 858 KRGFXAHSPXWSERPTPN*DTYSVXYEKAPRFPKGERRTGIR*XAGSEQESARGSXQG 685
+RG A+SP WSERP P+ DT SV YEKAPRFPKG++ + +G Q R + +G
Sbjct: 25 ERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
Score = 44.8 bits (101), Expect = 0.005
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = -3
Query: 755 EKGGQVSGXRQGRNRRAHEGAXRGKRLVXLXSCRVXPPLT 636
+K QVSG RQGRNRRAHEGA K L PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.0 bits (124), Expect = 8e-06
Identities = 36/91 (39%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 680 VSPXKLPRALSCSDPAXYRIPVRLSPFGKRGAFSXLTLXVSQFGVG-RSLQXGLC-AXNP 853
VS LP ALSCS+PA RIPV PF G+ + S RS + NP
Sbjct: 37 VSDESLPLALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNP 94
Query: 854 RXNPXXGPYPVNIVLXPXR*KXXXATGXXHW 946
+P PYPV + L P R ATG HW
Sbjct: 95 PFSPTAAPYPVTVHLSPTRKSTQNATGSSHW 125
Score = 47.6 bits (108), Expect = 7e-04
Identities = 29/76 (38%), Positives = 31/76 (40%)
Frame = +1
Query: 637 VKGGXTRQXYKXTRRFPLXAPSCALLFRPCRLPDTCPPFSLRETWXFLIXHAVXISIRCR 816
V+ G TRQ K P P PPFSL + IS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 817 SFAPXWAVCXKPPFXP 864
SFAP WAV PPF P
Sbjct: 83 SFAPSWAVSKNPPFSP 98
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 48.8 bits (111), Expect = 3e-04
Identities = 27/77 (35%), Positives = 36/77 (46%)
Frame = +1
Query: 493 YPXNQGITQEKXXXQKASKRPXTVKRPRCWXFSIGSAPLXXIXKIDAQVKGGXTRQXYKX 672
+P N I ++ + + + P T F S PL I KI Q K T+ YK
Sbjct: 38 HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97
Query: 673 TRRFPLXAPSCALLFRP 723
T FPL +PS +LLF P
Sbjct: 98 TTPFPLQSPSYSLLFPP 114
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 47.6 bits (108), Expect = 7e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 735 GYLSAFLPSGNVXLSHXSRCXYLNSV 812
GYLSAFLPSG+V LSH SRC YL+SV
Sbjct: 12 GYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 40.3 bits (90), Expect = 0.11
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3
Query: 459 AVSAHSKXVIRLSXKSGDNAGK 524
AVSAHSK VIRLS +SGDNAGK
Sbjct: 36 AVSAHSKAVIRLSTESGDNAGK 57
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 37.9 bits (84), Expect = 0.57
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 352 CINXSANARGXXVXXLGALPXPRSLXRCARSFGXGXRYQL-TQRX*YGYPXNQGITQ 519
CI A AR V L ALP RS RC RS G G + YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 37.1 bits (82), Expect = 0.99
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 858 KRGFXAHSPXWSERPTPN 805
+RG AHSP WSERPTPN
Sbjct: 25 ERGVRAHSPAWSERPTPN 42
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 35.5 bits (78), Expect = 3.0
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -2
Query: 858 KRGFXAHSPXWSERPTPN*DT 796
+RG A+SP WSERPTP+ DT
Sbjct: 25 ERGVLAYSPAWSERPTPSRDT 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,110,847
Number of Sequences: 1657284
Number of extensions: 7292449
Number of successful extensions: 10074
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10068
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 132414320193
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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