Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C14.2
(1329 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VYT6 Cluster: CG1967-PA; n=12; Bilateria|Rep: CG1967-... 52 3e-05
UniRef50_Q9Y3B3 Cluster: Transmembrane emp24 domain-containing p... 52 3e-05
UniRef50_UPI00015552F7 Cluster: PREDICTED: similar to Transmembr... 51 6e-05
UniRef50_Q6PHI4 Cluster: Tmed3 protein; n=6; Clupeocephala|Rep: ... 50 1e-04
UniRef50_A7SKI6 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.036
UniRef50_Q6IQJ4 Cluster: Tmed9 protein; n=26; Eumetazoa|Rep: Tme... 42 0.048
UniRef50_Q5BXH9 Cluster: SJCHGC04970 protein; n=1; Schistosoma j... 42 0.048
UniRef50_UPI0001556654 Cluster: PREDICTED: similar to transmembr... 37 1.0
UniRef50_UPI0000F2D739 Cluster: PREDICTED: similar to glycoprote... 37 1.0
UniRef50_Q7Z7H5 Cluster: Transmembrane emp24 domain-containing p... 37 1.0
UniRef50_O97055 Cluster: COP-coated vesicle membrane protein P24... 37 1.4
UniRef50_Q86QP3 Cluster: Putative uncharacterized protein; n=1; ... 36 2.4
UniRef50_Q9P7I9 Cluster: COPII-coated vesicle component Emp24; n... 36 2.4
UniRef50_Q769F8 Cluster: Emp24/gp25L/p24 family protein; n=2; Di... 36 3.1
UniRef50_Q86FA3 Cluster: Clone ZZZ312 mRNA sequence; n=1; Schist... 35 4.1
UniRef50_UPI0000EB2F0D Cluster: Transmembrane emp24 domain-conta... 35 5.5
UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD... 35 5.5
UniRef50_Q6BQN9 Cluster: Debaryomyces hansenii chromosome E of s... 34 9.6
>UniRef50_Q9VYT6 Cluster: CG1967-PA; n=12; Bilateria|Rep: CG1967-PA
- Drosophila melanogaster (Fruit fly)
Length = 210
Score = 52.0 bits (119), Expect = 3e-05
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Frame = +2
Query: 488 FTXNLCXMELNVGPEQPLPGVGXSCNCSYTVGEHLPKKFILHSTESLIIKLIID*ERLKD 667
F+ + ++ VG E LPGV + + +H + I+ RL++
Sbjct: 102 FSHKIVYVDFQVGEEPALPGVDEHAT---VLTQMETSSQAIHKGLNDILDAQTH-HRLRE 157
Query: 668 V---KEAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSD-KPTL--YNRL 808
K AEDLN++V WS ET A++ + Q+M+L+NFF+D KP+ Y RL
Sbjct: 158 AQGRKRAEDLNQRVMVWSSLETAAVIVIGLVQIMVLRNFFTDRKPSQAHYGRL 210
Score = 45.2 bits (102), Expect = 0.004
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +1
Query: 571 LHSWRTSAEEIHSALNRIIDHQTHHRLREAQG 666
L TS++ IH LN I+D QTHHRLREAQG
Sbjct: 129 LTQMETSSQAIHKGLNDILDAQTHHRLREAQG 160
>UniRef50_Q9Y3B3 Cluster: Transmembrane emp24 domain-containing
protein 7 precursor; n=55; Eumetazoa|Rep: Transmembrane
emp24 domain-containing protein 7 precursor - Homo
sapiens (Human)
Length = 224
Score = 52.0 bits (119), Expect = 3e-05
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDKPTLYNRL 808
AEDLN +V +WS+GE L ++ V+ QV +LK+FFSDK T R+
Sbjct: 179 AEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTTRV 222
Score = 38.7 bits (86), Expect = 0.34
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 571 LHSWRTSAEEIHSALNRIIDHQTHHRLREAQG 666
L ++ IH AL +ID+QTH RLREAQG
Sbjct: 144 LTQMESACVSIHEALKSVIDYQTHFRLREAQG 175
>UniRef50_UPI00015552F7 Cluster: PREDICTED: similar to Transmembrane
emp24 protein transport domain containing 7, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Transmembrane emp24 protein transport domain containing
7, partial - Ornithorhynchus anatinus
Length = 332
Score = 51.2 bits (117), Expect = 6e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDKPTLYNRL 808
AEDLN +V +WS+GE + ++ V+ QV +LK+FFSDK T R+
Sbjct: 287 AEDLNTRVAYWSVGEAIILLVVSIGQVFLLKSFFSDKRTTTTRV 330
Score = 38.7 bits (86), Expect = 0.34
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 571 LHSWRTSAEEIHSALNRIIDHQTHHRLREAQG 666
L ++ IH AL +ID+QTH RLREAQG
Sbjct: 252 LTQMESACVSIHEALKSVIDYQTHFRLREAQG 283
>UniRef50_Q6PHI4 Cluster: Tmed3 protein; n=6; Clupeocephala|Rep:
Tmed3 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 232
Score = 50.0 bits (114), Expect = 1e-04
Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Frame = +2
Query: 629 IIKLIID*E---RLKDVKE---AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDKP 790
I+K++ D + RL++ ++ AEDL+E+V +WS+GET+ + V QV++LK+FF++K
Sbjct: 166 ILKVVSDSQTWYRLREAQDRLRAEDLHERVHFWSIGETVILFVVCIGQVLMLKSFFNEKK 225
Query: 791 T 793
T
Sbjct: 226 T 226
>UniRef50_A7SKI6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 223
Score = 41.9 bits (94), Expect = 0.036
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +2
Query: 662 KDVKEAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDKPT 793
+D + A+ + +VFWWS+ +++A++ VA QV ++K+FF T
Sbjct: 178 RDFRLAKSKDSRVFWWSLIQSVALIGVAIVQVNVVKHFFGGGKT 221
>UniRef50_Q6IQJ4 Cluster: Tmed9 protein; n=26; Eumetazoa|Rep: Tmed9
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 226
Score = 41.5 bits (93), Expect = 0.048
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
+E N++V WWS+ +TL +V + F Q+ LK+FF K
Sbjct: 187 SESTNQRVLWWSIVQTLILVAIGFWQMRHLKSFFEAK 223
>UniRef50_Q5BXH9 Cluster: SJCHGC04970 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04970 protein - Schistosoma
japonicum (Blood fluke)
Length = 218
Score = 41.5 bits (93), Expect = 0.048
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2
Query: 665 DVKEAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFS 781
D AEDLN VF WS+ T +V + QV ILKNFFS
Sbjct: 180 DFLVAEDLNSAVFVWSIIITFVVVITSVGQVTILKNFFS 218
>UniRef50_UPI0001556654 Cluster: PREDICTED: similar to transmembrane
emp24 protein transport domain containing 4; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
transmembrane emp24 protein transport domain containing
4 - Ornithorhynchus anatinus
Length = 107
Score = 37.1 bits (82), Expect = 1.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
+E N++V WWS+ +T+ ++ Q+ LK+FF K
Sbjct: 68 SESTNQRVLWWSIAQTVILILTGIWQMRHLKSFFEAK 104
>UniRef50_UPI0000F2D739 Cluster: PREDICTED: similar to glycoprotein
25L; n=6; Amniota|Rep: PREDICTED: similar to
glycoprotein 25L - Monodelphis domestica
Length = 241
Score = 37.1 bits (82), Expect = 1.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
+ED N V WW++ + L ++ V Q+ LK+FF K
Sbjct: 202 SEDTNSSVLWWALAQMLILILVGIFQMKSLKDFFIAK 238
>UniRef50_Q7Z7H5 Cluster: Transmembrane emp24 domain-containing
protein 4 precursor; n=61; Coelomata|Rep: Transmembrane
emp24 domain-containing protein 4 precursor - Homo
sapiens (Human)
Length = 227
Score = 37.1 bits (82), Expect = 1.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
+E N++V WWS+ +T+ ++ Q+ LK+FF K
Sbjct: 188 SESTNQRVLWWSIAQTVILILTGIWQMRHLKSFFEAK 224
>UniRef50_O97055 Cluster: COP-coated vesicle membrane protein P24
homolog; n=3; Dictyosteliida|Rep: COP-coated vesicle
membrane protein P24 homolog - Polysphondylium pallidum
(Cellular slime mold)
Length = 206
Score = 36.7 bits (81), Expect = 1.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
AE N +V WWS+ E L +V ++ Q+ L+ FF K
Sbjct: 167 AESTNSRVVWWSIFEALILVAMSAWQIYYLRRFFEVK 203
>UniRef50_Q86QP3 Cluster: Putative uncharacterized protein; n=1;
Branchiostoma belcheri tsingtauense|Rep: Putative
uncharacterized protein - Branchiostoma belcheri
tsingtauense
Length = 114
Score = 35.9 bits (79), Expect = 2.4
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 665 DVKEAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDKPT 793
D A L+E+V WSM +++ +V + Q++ILK F++K T
Sbjct: 66 DRNNAMSLSERVQDWSMYQSVLVVVIGLGQMIILKTLFTEKQT 108
>UniRef50_Q9P7I9 Cluster: COPII-coated vesicle component Emp24; n=1;
Schizosaccharomyces pombe|Rep: COPII-coated vesicle
component Emp24 - Schizosaccharomyces pombe (Fission
yeast)
Length = 199
Score = 35.9 bits (79), Expect = 2.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
AE N++V WWS+ +T+ +V V Q+ LK F K
Sbjct: 160 AESTNDRVKWWSILQTVILVSVCVFQIFYLKRLFEVK 196
>UniRef50_Q769F8 Cluster: Emp24/gp25L/p24 family protein; n=2;
Dictyostelium discoideum|Rep: Emp24/gp25L/p24 family
protein - Dictyostelium discoideum (Slime mold)
Length = 209
Score = 35.5 bits (78), Expect = 3.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDKPT 793
+E N +V WW++ E + +V + Q+ L+ +F +K T
Sbjct: 168 SESTNARVVWWTIAEVIVLVVMGVGQIWYLRKWFDNKST 206
>UniRef50_Q86FA3 Cluster: Clone ZZZ312 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZZ312 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 162
Score = 35.1 bits (77), Expect = 4.1
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 686 LNEKVFWWSMGETLAIVCVAFTQVMILKNFFS 781
L+ +V +WS+G+ + IV QV+ L++FFS
Sbjct: 107 LHNRVIYWSLGQAVVIVIFGICQVLALRSFFS 138
>UniRef50_UPI0000EB2F0D Cluster: Transmembrane emp24
domain-containing protein 9 precursor (Glycoprotein
25L2).; n=2; Laurasiatheria|Rep: Transmembrane emp24
domain-containing protein 9 precursor (Glycoprotein
25L2). - Canis familiaris
Length = 264
Score = 34.7 bits (76), Expect = 5.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNF 775
+E N++V WWS+ +TL +V + Q+ LK+F
Sbjct: 193 SESTNQRVLWWSILQTLILVAIGVWQMRHLKSF 225
>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
protein - Plasmodium falciparum
Length = 960
Score = 34.7 bits (76), Expect = 5.5
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -3
Query: 1120 NIXIIFYLKFYIDFLTITIYLYP--DXVXINFFKYKYN 1013
NI +IFY+K+Y ++L IY+Y + IN +KYK N
Sbjct: 730 NIYVIFYIKYY-NYLNNIIYIYNICNKYNINHYKYKLN 766
>UniRef50_Q6BQN9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 181
Score = 33.9 bits (74), Expect = 9.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
AE N +V WWS+ + L + + Q+ LK FF K
Sbjct: 142 AESTNSRVKWWSVFQVLVVAANSVFQIYYLKRFFEVK 178
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,958,206
Number of Sequences: 1657284
Number of extensions: 10513738
Number of successful extensions: 20152
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20144
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 137273561301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -