Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C14.2
         (1329 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039713-7|AAB96722.1|  203|Caenorhabditis elegans Hypothetical ...    52   1e-06
Z81592-6|CAB04733.2|  431|Caenorhabditis elegans Hypothetical pr...    33   0.45 
AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical ...    30   4.2  
Z81592-3|CAB04729.2|  389|Caenorhabditis elegans Hypothetical pr...    29   5.6  

>AF039713-7|AAB96722.1|  203|Caenorhabditis elegans Hypothetical
           protein F57B10.5 protein.
          Length = 203

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 21/43 (48%), Positives = 31/43 (72%)
 Frame = +2

Query: 671 KEAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDKPTLY 799
           K AE+LNE+V  WS+G++  +V +   QV +LK+FF+DK T Y
Sbjct: 161 KRAEELNERVMIWSLGQSAVVVFIGIGQVFLLKSFFNDKRTRY 203



 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +1

Query: 592 AEEIHSALNRIIDHQTHHRLREAQG 666
           A  I   L  I D+QTHHRLREA G
Sbjct: 135 AVAIGDKLRTIDDYQTHHRLREATG 159


>Z81592-6|CAB04733.2|  431|Caenorhabditis elegans Hypothetical
           protein T16G1.6 protein.
          Length = 431

 Score = 33.1 bits (72), Expect = 0.45
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +2

Query: 572 YTVGE-HLPKKFILHSTESLIIKLIID*ERLKDVKEAEDLNEKVFW 706
           +T+ E HLPKKFIL    SL +  I+D  ++K+  ++ + NE+  W
Sbjct: 65  WTITENHLPKKFILKICSSLHVHGIVD--KMKESNQSINENEEELW 108


>AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical
           protein Y60A3A.9 protein.
          Length = 211

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 677 AEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSDK 787
           +E  N +VF+WS+ + + +      Q+  L+ FF  K
Sbjct: 172 SESTNSRVFYWSIAQVVVLAITGAWQMRHLRGFFEAK 208


>Z81592-3|CAB04729.2|  389|Caenorhabditis elegans Hypothetical
           protein T16G1.3 protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 581 GEHLPKKFILHSTESLIIKLIID*ERLKDVKEA 679
           GEHLP +F+L  T  + +  ++D   L+D  E+
Sbjct: 37  GEHLPNRFVLKITSCMHVLNVLDQMNLQDKSES 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,679,447
Number of Sequences: 27780
Number of extensions: 275187
Number of successful extensions: 541
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3725590724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)