Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C13.2
         (1312 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   7.3  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   7.3  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      29   7.3  
AL032626-10|CAA21531.1|  458|Caenorhabditis elegans Hypothetical...    29   9.6  
AF039716-2|AAB96737.1|  462|Caenorhabditis elegans Hypothetical ...    29   9.6  

>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 423 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 518
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 423 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 518
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 423 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 518
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>AL032626-10|CAA21531.1|  458|Caenorhabditis elegans Hypothetical
           protein Y37D8A.12a protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +3

Query: 522 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 701
           E  ++K   L T   NL    P ++ A  L + EK  K    T    K      TP   +
Sbjct: 374 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 427

Query: 702 MAESLIKFMRKDSPCHTALPK 764
           +  SLIK  +K+S    A P+
Sbjct: 428 LPPSLIKKKKKESTSEQAAPE 448


>AF039716-2|AAB96737.1|  462|Caenorhabditis elegans Hypothetical
           protein W03G9.3 protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +3

Query: 522 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 701
           E  ++K   L T   NL    P ++ A  L + EK  K    T    K      TP   +
Sbjct: 378 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 431

Query: 702 MAESLIKFMRKDSPCHTALPK 764
           +  SLIK  +K+S    A P+
Sbjct: 432 LPPSLIKKKKKESTSEQAAPE 452


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,305,948
Number of Sequences: 27780
Number of extensions: 377213
Number of successful extensions: 993
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)